Janthinobacterium sp. HH102: JAB4_029520
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Entry
JAB4_029520 CDS
T08624
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jah
Janthinobacterium sp. HH102
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jah03032
]
JAB4_029520
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_029520
Enzymes [BR:
jah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JAB4_029520
DNA replication proteins [BR:
jah03032
]
Prokaryotic type
DNA Topoisomerases
JAB4_029520
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JAB4_029520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
QOU73496
UniProt:
A0A853T264
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All DBs
Position
complement(3307775..3308890)
Genome browser
AA seq
371 aa
AA seq
DB search
MEISATTTARAAGLRYTGDHQNGIARSGKPGKFRYRDADGQIVRDSAALTRIKALAIPPA
WTDVWICPHANGHLQATGRDARGRKQYRYHARWRQVRDEVKYERMLSFGRALPAIHAAVA
RGMQLPGLPREKVLATIVHLLELTMMRIGNEEYARANKSFGLTTLRTRHVQVDGSAVAFH
FKGKSGVRHDIRLSDRKLATVLRRMRELPGQELFQYIDDAGARHGVDSGDVNDYLREVTG
EDYTAKDFRTWSGTLLAALALQAFEQVDSDAQAKKNIVQAIESVAKKLGNTPTICRKCYV
HPAVLESYLEGSLLEGMRARAQEQLREELPALAPEEAAVLALLQQRLQAQAASKAAVKPG
ARAGAGTGPTA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatctgccaccaccacggcccgcgccgccggcctgcgctacacgggcgaccat
cagaacggcatcgcccgatcgggcaagcccggcaagttccgctaccgcgacgcggacggc
cagatcgtgcgcgatagcgccgccttgacgcgcatcaaggcgctggccattccgcccgcc
tggacggatgtgtggatatgcccgcacgcgaatggccatttgcaggcgacgggacgcgat
gcgcgtggccgcaagcagtaccgctaccatgcgcgctggcgccaggtgcgcgacgaagtg
aaatatgaacgcatgctcagctttggccgcgccctgcccgccatccacgcggccgtcgcg
cgcggcatgcagctgccgggcttgccacgcgaaaaagtgctggccaccatcgtgcacctg
ctggaactgacgatgatgcgcatcggcaacgaagaatatgcgcgcgcgaacaaatcgttc
ggcctgaccaccctgcgcacgcgccacgtgcaggtcgacggcagcgccgtggcctttcac
ttcaagggcaagagcggcgtgcgccacgatatccgcctgagcgaccgcaagctggccacg
gtgctgcggcgcatgcgcgagttgccgggccaggaactgtttcaatacatcgatgacgct
ggcgctcgccacggcgtcgattcgggcgacgtcaacgattatctgcgcgaggtgacgggc
gaagactacacggccaaggatttccgcacctggtccggcaccctgctggccgcgctggcc
ctgcaggcgttcgagcaggtcgattccgatgcgcaagccaagaaaaacatcgtgcaggcg
atcgagtccgtggcgaaaaaactgggcaatacgccgacgatctgccgcaagtgctatgtg
cacccggccgtgctggaatcgtatctggagggcagtttattggaaggcatgcgcgcgcgg
gcgcaggagcaattacgggaagaactgccggcgctggcgccggaggaagcggccgtgctg
gctttgctgcagcagcgcttgcaagcgcaggccgccagcaaggcggcggtcaagcctggc
gcgcgggctggcgctggcactgggccgacagcgtga
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