Janthinobacterium sp. HH102: JAB4_034600
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Entry
JAB4_034600 CDS
T08624
Symbol
phrB_1
Name
(GenBank) (6-4) photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
jah
Janthinobacterium sp. HH102
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_034600 (phrB_1)
Enzymes [BR:
jah01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
JAB4_034600 (phrB_1)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
JAB4_034600 (phrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QOU74001
UniProt:
A0A7M2NKF4
LinkDB
All DBs
Position
complement(3853730..3855268)
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AA seq
512 aa
AA seq
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MTPKPTLRLILGDQLNTQHRWFTDVDDATIYVLMEVRQETDYVLHHAQKILAIFAAMRDF
ARQLREDGHAVHYIAIGDVASTRSIPENIEALIRHYDAGAVEYQAPDEWRLDQQLYQAGR
RSAIPWLMVDSEHFYTARHEAADIFAGRKQWLMEFFYRQMRGTHQVLMEDAKKPVGGQWN
FDHDNRKPWRGTPAEPQDPRTVHDHSRLWEGIVAAGVKSFGAPCADRLAWALNRDEALQQ
LDAFIERALPHFGDFQDAMSSKAWRLFHSLLSFALNVKMLNPREVVDRAQAAYYAGHAPL
AAVEGFIRQILGWREYVRGVYWAQMPGYAEKNFFGHARALPSWFWDGKTKMHCLSQAITQ
SLEQAHAHHIQRLMVIGNFALLAGLDPAKVHGWYLGIYIDAFEWVELPNTVGMSQFADGG
LLATKPYVSSAAYIDRMGDYCKGCHYDKKARIGERACPFNALYWDFFHRNAATLEHNPRI
GMAYRQLEKMDEETVTAFRQQAATMLARLDSL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgacaccgaagcccaccttgcgcctgatcctcggtgaccagctcaatacgcagcaccgc
tggtttaccgacgtcgacgacgccaccatctacgtcttgatggaagtgcggcaagaaacc
gattatgtgctgcatcacgcgcagaaaatcctggccatcttcgctgccatgcgcgacttt
gcgcgccagctgcgcgaggatggccacgccgtgcattacatcgccatcggcgacgtggcc
agcacgcgctcgataccggagaatatcgaagcgctgattcgccactatgacgccggcgcc
gtcgaataccaggcgcccgacgagtggcgcctcgaccagcagctctaccaggccggacgg
cgctcggccatcccgtggctgatggtcgacagcgagcatttctatacggcccgccacgag
gcggccgatattttcgccgggcgcaagcaatggctgatggagtttttctaccgccagatg
cgcggcacgcatcaggtgttgatggaagacgcgaaaaaacccgtcggcggccagtggaat
ttcgatcacgataaccgcaagccctggcgcggcacgcccgccgagccgcaagacccgcgc
accgtgcatgaccattcgcgtctatgggaaggcatcgtcgccgccggcgtgaagagcttc
ggcgcgccctgtgcggaccggctggcctgggcgctgaaccgggatgaggcgctgcagcag
ctcgatgccttcatcgagcgggccttgccgcattttggcgatttccaggatgccatgagc
agcaaggcctggcgcctgttccactccctgctgtcgttcgcgctgaacgtgaaaatgctg
aacccgcgcgaagtcgtcgacagggcgcaggccgcctattacgccggccacgctcccctg
gccgcggtcgagggcttcatccgccagatcctgggctggcgcgaatatgtgcgcggcgtc
tactgggcgcagatgcccggttatgcggaaaagaatttctttggccatgcgcgtgcgctg
ccctcctggttctgggacggcaagacgaagatgcattgtttgtcgcaggcgatcacgcag
tcgctggaacaggcgcacgcgcatcacatccagcgcctgatggtaatcggcaacttcgcg
ctgctggccggcctcgatcccgccaaggtccacggctggtacctgggcatttacatcgat
gccttcgaatgggtggaactgcccaataccgtcggcatgagccagttcgccgacggcggc
ctgctggccaccaagccgtatgtctccagcgccgcgtatatcgaccgcatgggcgattat
tgcaagggatgccattacgacaagaaggcgcgcatcggcgagcgcgcctgccccttcaat
gccctgtactgggattttttccaccgcaacgcggccacgctggagcacaatccccgcatc
ggcatggcgtatcgccagctggaaaaaatggacgaggaaacagtcaccgctttccggcag
caggcggccacgatgctggccaggctcgattccttgtaa
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