Janthinobacterium sp. HH102: JAB4_040470
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Entry
JAB4_040470 CDS
T08624
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JAB4_040470 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jah03019
]
JAB4_040470 (rnc)
03009 Ribosome biogenesis [BR:
jah03009
]
JAB4_040470 (rnc)
03036 Chromosome and associated proteins [BR:
jah03036
]
JAB4_040470 (rnc)
Enzymes [BR:
jah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JAB4_040470 (rnc)
Messenger RNA biogenesis [BR:
jah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JAB4_040470 (rnc)
Ribosome biogenesis [BR:
jah03009
]
Eukaryotic type
90S particles
RNase
JAB4_040470 (rnc)
Prokaryotic type
rRNA processing factors
JAB4_040470 (rnc)
Chromosome and associated proteins [BR:
jah03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JAB4_040470 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QOU74571
LinkDB
All DBs
Position
complement(4508371..4509186)
Genome browser
AA seq
271 aa
AA seq
DB search
MNLQLLQTRLGYTFQDAGLLQQALTHRSHSSLHNERLEFLGDSILNCVVASILYERFKTI
DEGDLSRLRANLVKQQSLYEIAQKLELSQFLRLGEGELKSGGFRRPSILADTLEALLGAI
FLDTGFDAASTVIRAFYIPILDSVDPQTLGKDAKTLLQEFLQSKKISLPQYNVVATHGAA
HSQEFEIECLVPKLNIQVYGRGGSRRAGEQAAAKLALDVAEQALLKSPAASRKPKPRAAQ
LKLAGIATIQSDDAPAPAAPAIAAHTKQNRH
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcagctattgcaaacccgtttaggctatacgttccaggatgctggcctgttg
cagcaagccttgacgcaccgtagccacagcagtttgcataacgagcggctggaattcctc
ggcgactccatcctcaactgcgtggtcgcttccatcctgtacgaacgtttcaagaccatc
gacgaaggcgacctgtcgcgcctgcgtgccaacctggtcaagcagcagtcgctgtatgaa
atcgcgcaaaagctggaattgtcgcaatttttgcgcctgggcgaaggcgagctcaaatcg
ggcggcttccgccgtccatcgatcctcgccgacacgctggaagccttgctgggcgccatc
ttcctcgacacgggcttcgacgccgccagcacggtgatccgcgccttctacattcccatc
ctcgactcggtcgatccgcaaacgctgggcaaggatgccaagaccctgctgcaggagttt
ttgcagagcaagaaaatttcgctgccacagtacaacgtggtggctacccatggcgccgcc
cacagccaggaattcgagatcgaatgcctggtgccgaaattgaacatccaggtttacggc
cgtggcggaagccgccgcgccggtgagcaagccgccgccaaactggcgctggacgtggcc
gagcaggcgctgttgaagtcgcctgccgccagccgcaagcccaaaccgcgcgccgcccag
ctcaagctggccggcattgccaccatccagagcgacgacgcgccagccccggctgccccg
gcgatcgccgctcacactaaacagaatcgacactag
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