Janthinobacterium sp. HH102: JAB4_054760
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Entry
JAB4_054760 CDS
T08624
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JAB4_054760 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jah03019
]
JAB4_054760 (recQ)
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_054760 (recQ)
Enzymes [BR:
jah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JAB4_054760 (recQ)
Messenger RNA biogenesis [BR:
jah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JAB4_054760 (recQ)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JAB4_054760 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
QOU75987
UniProt:
A0A853T4H0
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All DBs
Position
6091304..6093127
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AA seq
607 aa
AA seq
DB search
MNQDLNQRALHLLQTVFGYPAFRGQQADIVDHVSHGGDALVLMPTGGGKSLCYQIPALLR
DGVGVVVSPLIALMQDQVDALEEVGVRAAFLNSTQTYEEASRIERLVRTGGIDVVYVAPE
RLMTQRCLDLFQASKISLFAIDEAHCVAQWGHDFRPEYIKLSVLHEQFPDVPRIALTATA
DPQTRAEIALRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFINTEHAGDCGIVYC
LSRKKVEETAEFLNQSGIRALPYHAGMEYAKRSANQARFLREENIVMVATIAFGMGIDKP
DVRFVAHLDLPKSIEGYYQETGRAGRDGMAANAWMAYGLQDVVLQRRMIDESEADDTFKR
VLGVKLDAMLGLCETLSCRRMRLLEYFGEPASPCGNCDTCLVPPVSFDGTVPVQKLLSAI
YRVDQRFAGGHVIDVLRGVESERIKTWHHDSLSVFGIGSDLGEAEWKSILRQAIALGLVS
VDHEQYSSLKLTDASRPVLKGGQKVQLRQYQKPVKTSKRSTSVAKGYVETDLSTSEQAIF
DKLRWWRVETARTHNVPAYVIFVDATLREIAKAKPTSLEQMRGVSGVGEKKLASYGDEIV
AMILEMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagatcttaaccagcgcgcgctgcacctgctgcaaaccgttttcggctacccg
gccttccgcggccagcaagccgacatcgtcgaccacgtcagccatggcggcgacgcgctg
gtgctgatgcccacgggcggcggcaagtcgctgtgctaccagattcccgcactgctgcgc
gatggcgtcggcgtcgtcgtctcgccgctgatcgcactgatgcaggaccaggtggacgcg
ctggaagaagtcggcgtgcgcgccgccttcctgaactccacccagacctacgaagaagcg
agccgcatcgagcgcctggtgcgcacgggcggcatcgacgtcgtctacgtggcgcccgag
cgcctgatgacgcagcgctgccttgacctgttccaggcgtcgaagatctccctgttcgcc
atcgacgaggcgcactgcgtagcccagtggggccacgacttccgtcccgaatacatcaag
ctgtcggtgctgcacgagcagttcccggacgtgccgcgcatcgcgctcacggccacggcc
gacccgcagacgcgcgccgaaatcgcgctgcgcctgcagctggaagacgcgcgccagttc
gtctcgtccttcgaccgcccgaacatccgctaccagatcgtggaaaaggcgaatggccgc
aagcagctgctcgacttcatcaacacggaacacgcgggcgactgcggcatcgtgtactgc
ctgtcgcgcaaaaaggtcgaagagacggcggaatttctgaaccagagcggcatccgcgcc
ctgccctaccacgccggcatggagtacgccaagcgcagcgccaaccaggcgcgcttcctg
cgcgaggaaaacatcgtcatggtcgccaccatcgccttcggcatgggcatcgacaagccc
gacgtgcgcttcgtcgcgcatctggatctgccgaaaagcatcgagggctattaccaggaa
acggggcgcgcgggccgcgacggcatggccgccaacgcctggatggcgtacggcttgcag
gacgtggtgctgcagcggcgcatgattgacgaatcggaagcggacgacaccttcaagcgc
gtgctgggcgtgaagctcgacgccatgctgggcctgtgcgaaacgctcagctgccgccgc
atgcgattgctcgaatacttcggcgaaccggcttcgccgtgcggcaattgcgacacctgc
ctggtgccgcccgtgtcgttcgacggcacggtgcccgtgcaaaaactgctgtcggccatc
taccgcgtcgaccagcgcttcgccggcggccatgtgatcgacgtgctgcgcggcgtggaa
tcggaacgcatcaagacctggcaccacgattcgctgtcggtcttcggcatcggctcggac
ctgggcgaagcggaatggaaatcgattttgcgccaggccatcgcgctcggtctcgtctcg
gtcgaccatgaacaatacagctcgctgaaactgacggacgcctcgcgccccgtgctcaag
ggcggccagaaggtgcagctgcgccagtaccagaaaccggtgaaaaccagcaagcgcagc
accagcgtggcgaagggttatgtcgagacggacttgtccaccagcgagcaggcgatcttc
gacaaactgcgctggtggcgcgtagagacggcgcgcacccacaacgtgcccgcctacgtg
attttcgtcgacgccaccctgcgcgaaatcgccaaggccaagcccacctcgctcgagcag
atgcgcggcgtgagcggcgtgggcgagaaaaaactggcctcgtacggcgacgaaatcgtc
gccatgatcctggagatgatttga
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