Janthinobacterium sp. HH102: JAB4_054950
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Entry
JAB4_054950 CDS
T08624
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah03030
DNA replication
jah03430
Mismatch repair
jah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JAB4_054950 (holA)
03430 Mismatch repair
JAB4_054950 (holA)
03440 Homologous recombination
JAB4_054950 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jah03032
]
JAB4_054950 (holA)
03400 DNA repair and recombination proteins [BR:
jah03400
]
JAB4_054950 (holA)
Enzymes [BR:
jah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JAB4_054950 (holA)
DNA replication proteins [BR:
jah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JAB4_054950 (holA)
DNA repair and recombination proteins [BR:
jah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JAB4_054950 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QOU76005
UniProt:
A0A853T564
LinkDB
All DBs
Position
complement(6113966..6114982)
Genome browser
AA seq
338 aa
AA seq
DB search
MQLRIDALDGHVAKPLAQLYVITSDEHLLALEAADKIRRAARAQGYSERDVLTVERSFKW
GELLAANQELSLFGDKKLIELRIPTGKPGKDGGAALQSYAKNLSPDNLTLITLPKLDWAT
QKAAWVASLQQAAVYIDIPNVERAQLPAWISQRLAAQGQSAERASIDFIAERVEGNLLAA
HQEIQKLGLLHAAGKLTYEQVQDAVLNVARYDVFKLSEAMLAGDPARLVRMLEGLKGEGE
ALPLVLWAVSEEIRTLLKLKAGMAQGRPLGALLKEYRIWGPRERMMEPALRRISLPVLEA
ALQQAAQVDKMIKGLRAKGYAGDAWDAMLQLGLKIARG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcggatagatgcgctcgatgggcatgtggccaagccgctggcgcagctgtat
gtgatcaccagcgacgaacacttgctggcgctggaagcggccgacaagatccgccgcgcg
gcgcgcgcgcagggctactccgagcgcgacgtgctgacggtggagcgcagcttcaagtgg
ggtgaactgctggcggcgaaccaggagctgtcgctgttcggcgataaaaaactgatcgaa
ctgcgcatccccacgggcaagccgggcaaggatggcggcgcggcgctgcaaagctacgcg
aaaaacctcagtcccgacaacctgaccctgatcaccttgcccaagctggattgggccacg
caaaaggcggcctgggtcgccagcctgcagcaggcggccgtgtatatcgacattccgaat
gtggaacgggcacagttgccggcgtggatatcgcagcgcctggccgcgcaggggcaaagc
gccgagcgtgccagcatcgacttcatcgccgaacgggtggaaggtaacttgctggcggcg
caccaggaaatccagaagctgggcttgctgcatgccgcgggcaagctgacgtacgaacaa
gtgcaggacgcggtgctgaacgtggcccgctacgatgtcttcaagctgtccgaagccatg
ctggccggcgacccggcgcgcctggtgcgcatgctcgaaggcttgaaaggcgagggcgag
gcgctgccgctggtcttgtgggccgtctccgaggaaatccgcacgctgttaaaattgaag
gccggcatggcgcaagggcgtccgttgggcgcgctgctgaaggaataccgcatctggggt
ccgcgcgagcggatgatggaaccggccctgcggcgcatttcgctgcccgtgctggaagcg
gcgctgcagcaggcggcgcaggtggacaagatgatcaagggtttgcgcgccaagggctac
gcgggcgatgcctgggacgccatgctgcaactgggactgaagatcgcccgaggctag
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