Janthinobacterium sp. HH102: JAB4_055160
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Entry
JAB4_055160 CDS
T08624
Symbol
ramB
Name
(GenBank) HTH-type transcriptional regulator RamB
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
jah
Janthinobacterium sp. HH102
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jah03000
]
JAB4_055160 (ramB)
Transcription factors [BR:
jah03000
]
Prokaryotic type
Helix-turn-helix
XRE family
JAB4_055160 (ramB)
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Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_3
HTH_31
HTH_19
HTH_26
HTH_25
HTH_24
HTH_37
Motif
Other DBs
NCBI-ProteinID:
QOU76026
LinkDB
All DBs
Position
6134855..6136237
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AA seq
460 aa
AA seq
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MAKVFMGVRLQRLREERRMTQVALAKALGISPSYLNQMERNQRPLTVPILLRIGTVLGVD
PQIFSEHDSASLVADVRDVFGELPDAPPTSMAELKMLVENMPELARSILLLQRRYRVMAE
RADTLAARLDDGSRGASSAAPSTDEEVREYLNRRQNYIDELDRAAERVAGELDPSLRTLD
ALQGRLLERHGIQVRLSDGDAGMVRKHRYDAQQHILFLPDTLTGGQRAFQMAAQISLLEH
SDLIDALVLAAGLSGAAAQTGARLAFSNYFAGALLMPYQRFLQAAETRAYDIERLAHQFG
VGFEAVCHRLSTMQRPEAAGLPFFFVRVDRAGNVSKRQSATDFHFSRVGGTCPLWIVYDA
FSHPGQVLTQVASMPDGCTYLWIARQVSTASPGFRAPGKTFAVALGCDISQAHRLIYSKG
LDLHDPSSATPIGTGCKVCERQSCPQRAFPSLLAPPPASA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggttttcatgggcgtgcgcctgcagcggctgcgcgaggaacggcgcatgacg
caggtggcgctggccaaggccctgggcatctcgcccagctacctgaaccagatggagcgc
aaccagcgcccgctgacggtgccgattctgttacgcatcggcacggtgctgggcgttgac
ccgcaaatcttttccgagcacgacagcgccagcctggtggccgatgtgcgcgacgtgttc
ggcgaattgcccgacgcgccgcccacctcgatggcggaattgaaaatgctggtggaaaac
atgccggaactggcgcgctcgattttgctcttgcagcggcgctaccgcgtgatggcggaa
cgggccgatacgctggccgcgcgcctcgacgacggcagccgcggcgccagctcggccgcg
ccctccacggacgaggaagtgcgcgaatacctgaaccggcggcaaaactatatcgatgag
ctggaccgggcggccgaacgggtggcaggcgaactcgatccctccctgcgcacgctcgac
gcgctgcaaggccggctgctggagcgccacggcatccaggtgcgcttgtccgatggcgac
gcgggcatggtgcgcaagcaccgctacgatgcccaacaacatatcctgtttttgcccgac
accctgacaggtggccagcgcgccttccagatggcggcgcaaatcagcctgctcgagcac
agcgacctgatcgacgcgctcgtgctggcggcaggactctcgggcgcggccgcgcagact
ggcgcacgcctggccttctcgaattatttcgccggcgccctcttgatgccgtaccagcgt
tttttacaggcggcggaaacgcgcgcctacgatatcgagcgcctggcgcaccagttcggc
gtgggcttcgaggccgtgtgccaccgtttgagcaccatgcagcgccccgaggcggcgggg
ctgccgtttttcttcgtgcgcgtcgaccgcgcgggcaatgtctcgaagcgccagtcggcc
acggattttcacttttcaagagtgggcggcacttgccccctgtggatcgtgtacgacgcc
ttcagccatccgggccaggtgctcacgcaagtggccagcatgcccgacggctgcacctat
ttatggatcgcgcgccaggtcagcacggcgtcaccgggcttccgcgcgcccggcaagacg
tttgccgtggcgctgggctgcgacatctcgcaggcgcaccggctgatctattcgaaggga
ctcgatttgcacgacccttccagcgccacacccatcggcacgggctgcaaggtgtgcgag
cgccaaagctgcccgcagcgggcgtttccgtcgctgctggccccgccgccggcatcggcc
tga
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