Janibacter alittae: V1351_03755
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Entry
V1351_03755 CDS
T10540
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jai Janibacter alittae
Pathway
jai03420
Nucleotide excision repair
jai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1351_03755
03430 Mismatch repair
V1351_03755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jai03400
]
V1351_03755
Enzymes [BR:
jai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1351_03755
DNA repair and recombination proteins [BR:
jai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1351_03755
MMR (mismatch excision repair)
Other MMR factors
V1351_03755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
WXB77190
LinkDB
All DBs
Position
758534..761803
Genome browser
AA seq
1089 aa
AA seq
DB search
MTRSPRIGAVELARALGQEHPPTHEQREIIEAPLEPLLVVAGAGSGKTETMTARVVWLVA
NDLVAPEEVLGLTFTRKAAGELAERVVRRLATLEQTGVWTPPQGVEADALGGTPTISTYH
SYAGRLVREGALRLGYEKDSRLLSEAASWQLAHEVVLAWDGPMEEIDKVESTVTNAIISL
AGEMAEHLCTPQDIEDFARRALAHLEGVAASDKDFTKDYRGKVLTPMAEQRLILPIVERY
RQIKRERSVMDFADQMALAAALASRFPDIGQAERDRFRVILLDEFQDTSEAQLVLMRELF
APAEGTPAAVTAVGDPHQSIYAWRGASATTLENFPRFFATTGAQAPVRHLSTSWRNDETI
LEVANVVAGPLGATSGVPVTSLRPRPGAGRGQVQAVRAETAHDEAGQVADWIQIRRGAGD
GGASRRSAAVLCRKRSQFTLIAEALAVRNIPHEVVGLGGLLLTPEVADVISLLTIVQDPA
RGDRLMRLLTGAPGLLGPADLDGFGAWARHLGKQAVAGSCEAGAADAGVPPGPDDVVTIV
DALDQLPEPGWLGESGQSISAAALQRLQHIGAMVSRLRRGAGMPLPDLVGEAERELGVDV
EVLSRPGWSPAAARAHLDAFADVAAQFAASADRPTLGGFIDWIEAAVEQERGLEAPVVEP
TKDAVQILTCHAAKGLEWDVVAVPGLSEGVFPAHASRSSFKEGTWTLGQVNESGWISGLD
GVPYPLRGDRDGLPHLDLSLGETKPLQEELKRYRAAGGEHGLLEERRLAYVACTRARSQL
LLGSWVWGATGQQPRLPSRFLDEMRTTGVVETLDWAEMPETKDVRNPALEVARQVMWPVD
EQAPEHPHLAAAADGMGSETQVDLGADPLDEQMRILLEERERRRRARGEDAHVELPAHLS
TSQLVSLARDPEAFALDLRRPMPQPPQVTGRRGTAFHAWVEEHYARAGLVDILEMPGSAD
ENRGDADLARMQAQFLASEWAERVPLDVELSLETIIGGHAIRGRVDAVFADEDGEVTVVD
WKTGRPPTGQEGVVRAVQLSAYRIAYARWRGIDPGRVHGAFFYAATGETTRPEMLDEDAI
VRFLGAAVT
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgacccggtcaccgaggatcggagcagtcgagctcgcacgcgcgctggggcaggagcac
ccaccgactcacgagcagcgcgagatcatcgaggccccgctcgagccgctgctcgtcgtc
gcgggtgccggctcgggcaagaccgagaccatgaccgctcgagtcgtctggctcgtggcc
aacgatctcgtcgcgcccgaggaggtcctcgggctgaccttcacgcgcaaggcggcgggc
gagctcgccgagcgggtcgtgcggcgcctggcgaccctggagcagaccggggtgtggaca
cctccgcagggggttgaggccgacgctctcggggggacgccgacgatctcgacgtaccac
tcctacgccggtcgtctcgtgcgcgagggcgccctgcggctcggctacgagaaggactcc
cgcctcctgtcggaagccgcgagctggcagctcgcccacgaggtggtcctggcctgggac
gggcccatggaggagatcgacaaggtcgagtcgacggtgaccaacgcgatcatctcgctg
gccggcgagatggccgagcacctgtgcacgccccaggacatcgaggacttcgcccgacgc
gcgctcgcccacctcgagggcgtcgccgcctcggacaaggacttcaccaaggactaccgc
ggcaaggtcctcaccccgatggccgagcagcggctcatcctgccgatcgtcgagcgctac
cgccagatcaagcgcgagcggtccgtgatggacttcgccgaccagatggcgctcgctgcg
gcgttggcctcgcgcttccccgacatcggtcaggccgagcgggaccgcttccgggtcatc
ctgctcgacgagttccaggacacctcggaggcccagctggtgctcatgcgcgagctcttc
gccccggccgaggggacgccggccgcggtcacggcggtcggcgacccgcaccagtcgatc
tacgcctggcgcggggcgagcgccacgaccctggagaacttcccgaggttcttcgcgacg
accggggcgcaggcgccggtcaggcacctgtcgaccagctggcgcaacgacgagacgatc
ctcgaggtggccaatgtcgtcgccggtcccctgggcgcgacgagcggcgtcccggtgacc
tccttgcgtcctcgtccgggcgccggacgcgggcaggtccaggcggtgcgggccgagacc
gcccacgacgaggccgggcaggtcgcggactggatccagatccggcggggcgccggcgac
gggggcgcctcccgccgcagcgcggcggtcctgtgccgcaagcggagccagttcaccctc
atcgccgaggcgctcgcggtgcgcaacatcccgcacgaggtcgtcggcctcggtggactg
ctccttactcccgaggtggccgacgtcatctccctgctgaccatcgtgcaggacccggca
cgcggtgaccggctgatgcggctgctcaccggcgccccggggctgctcggcccggccgac
ctcgacgggttcggcgcgtgggccaggcacctcgggaagcaggccgtcgccggctcctgc
gaggccggcgccgccgacgcaggagtgccgccgggaccggacgacgtcgtgacgatcgtc
gatgccctggaccagctgcccgagccgggctggttgggggagtcggggcagtcgatctcg
gccgccgcactgcaacggctgcagcacatcggcgcgatggtctcccgcctgcgccggggg
gccggcatgccgttgcccgatctcgtcggcgaggccgagcgtgagctgggcgtcgacgtc
gaggtcctctcccgtcccggctggtcgcctgcggccgcccgggcccacctcgacgccttc
gccgatgtcgcggcgcagttcgccgccagcgcggatcgaccgaccctcggtggcttcatc
gactggatcgaggcggccgtcgagcaggagcggggcctcgaggcgccggtcgtcgagccg
acgaaggacgccgtccagatcctcacctgccacgccgccaaggggctcgagtgggacgtc
gtcgccgtccccggcctctccgagggagtcttccccgcacacgcctcgcggtcctccttc
aaggagggcacgtggaccctcgggcaggtcaacgagtcgggttggatctccggtctcgac
ggggtcccctatcccctgcgaggtgaccgcgacgggctgccacacctcgatctgtcgctc
ggcgagaccaagccactgcaggaggagctcaaacgctatcgcgccgcgggcggcgagcac
gggctgctcgaggagcgacgcctggcctatgtcgcctgcacgcgggcgcggagccagctg
ctgctcggatcatgggtgtggggcgcgaccgggcagcagccccggctgccctcccgcttc
ctcgacgagatgcgcaccaccggcgtcgtggagaccctcgactgggccgagatgccggag
accaaggacgtgcgcaaccctgcgctcgaggtcgctcgccaggtcatgtggccggtcgac
gagcaggctcccgagcatccgcacctggccgcggccgcggacgggatgggatcggagacc
caagtggacctcggggcggatccgctcgacgagcagatgcggatcctgctcgaggagcgc
gagcggcgtcgccgagctcgcggggaggacgcccacgtcgagctgccggcacacctgtcg
acctcgcagctggtctcgctcgcgcgggacccggaggccttcgcgctcgatctgcgtcga
ccgatgccgcagcctccgcaggtcaccggccgccgcggaacggccttccacgcctgggtg
gaggagcactacgcgcgtgccgggctggtcgacatcctcgagatgcccggcagcgccgac
gagaaccgcggcgacgccgacctcgcgcgcatgcaggcgcagttcctcgccagcgagtgg
gccgagcgggtgccgctcgacgtcgagctctccctcgagacgatcatcggtggccacgcg
atccgcggtcgcgtcgacgccgtcttcgcggatgaggacggggaggtgaccgtcgtggac
tggaagacgggtcgtccgcccaccggccaggagggcgtcgtgcgtgccgtccagctgtcg
gcctaccggatcgcctacgcccgctggcgggggatcgaccccggtcgggtgcacggcgcg
ttcttctacgcggccacgggggagacgacccgacccgagatgctcgacgaggacgcgatc
gtccggttcctcggtgcggcggtcacctga
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