KEGG   Janibacter alittae: V1351_04800
Entry
V1351_04800       CDS       T10540                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
jai  Janibacter alittae
Brite
KEGG Orthology (KO) [BR:jai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jai03032]
    V1351_04800
   03036 Chromosome and associated proteins [BR:jai03036]
    V1351_04800
   03400 DNA repair and recombination proteins [BR:jai03400]
    V1351_04800
DNA replication proteins [BR:jai03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    V1351_04800
Chromosome and associated proteins [BR:jai03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    V1351_04800
DNA repair and recombination proteins [BR:jai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      V1351_04800
SSDB
Motif
Pfam: Bac_DNA_binding HC2 HU-HIG
Other DBs
NCBI-ProteinID: WXB77387
LinkDB
Position
990013..990792
AA seq 259 aa
MNKAELVKALEERLGSRKAAQEALEVVLDTIVREVAKGGRVAITGFGTFEKAARAARTGR
NPRTGEVVKIKKTTVPRFKAGTSFKTYVADPKSLPKAAPAAARAAAGTVTSAAGTARAIA
GSAVPGGKKVKKGSSAESTSSAATSSATTKKTAPARKSTASTSTAKKSTAKKSTAKKSTP
AKKSTATTSTAKKSTPARKSTASTSTATSAKKAAPAKKSTASKSTAKKSTAKKSTAKKST
PARKSSATKSTSSSDSGSS
NT seq 780 nt   +upstreamnt  +downstreamnt
gtgaacaaggcagaactcgtcaaggctctcgaagagagactgggtagccggaaggcggcc
caggaggcactggaggtcgtgctcgacacgatcgtccgtgaggtggccaaggggggtcgc
gtcgccatcaccggtttcggcaccttcgagaaggcggcccgcgccgcccggaccggccgc
aacccgcgcaccggtgaggtcgtgaagatcaagaagaccactgtcccgcgcttcaaggcc
ggtaccagcttcaagacctacgtcgccgaccccaagtcactgccgaaggccgcccccgcc
gcggctcgagccgcagccggcaccgtcacctccgcagcgggcaccgcacgggccatcgcc
ggcagcgccgtcccgggaggcaagaaggtcaagaagggctcgtcggcggagtcgacgtcc
tccgccgccacgtcctcggccacgacgaagaagactgctccggccaggaagagcaccgcg
tcgacgtcgacggccaagaagtcgacggccaagaagtcgacggccaagaagtcgactccg
gccaagaagagcaccgcaacgacgtcgaccgccaagaagtcgactccggccaggaagagc
accgcatcgacgtcgacggccacctcggcgaagaaggctgctccagcgaagaagtcgacc
gcgtcgaagtccacggccaagaagtccacggccaagaagtccacggccaagaagtccacc
ccggccaggaagagcagcgccacgaagtccacgagcagttcggactccggctccagctga

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