Janibacter alittae: V1351_05750
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Entry
V1351_05750 CDS
T10540
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
jai Janibacter alittae
Brite
KEGG Orthology (KO) [BR:
jai00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V1351_05750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jai03021
]
V1351_05750
Transcription machinery [BR:
jai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V1351_05750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
WXB77572
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Position
1191428..1193098
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AA seq
556 aa
AA seq
DB search
MTAVSPRSDGAQGSLPKEFSHPALQELVRQGHTAGLVTPDQLQIAFSEAKISPSRGKAVL
RALDDQGIEVQVPKSIAAKKTAKKAPAKKAAAAKKTETPAKKASATKAGTSTKTAAKKTT
DAQADETPAKKTSATKAASKKTTATPTSTKAAAKKTTAKKTAATKTTAAAAAAPPKKVAP
AKQAAAKKAAAKSAASNPTTTTAEEPEEGEDEVLGEDPKDTSRTKRDETDEKGGFVISND
DEGDAPAQQVVTAGATADPVKDYLKQIGKVALLNAEQEVELAKRIEAGLFAEEKLATAEK
IDMKFKRELWWISQDGKNAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAV
EKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGR
EPTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVS
FTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMS
KLRHPSRSQVLRDYLD
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctgtgtccccacggtccgatggggcgcagggctccctccccaaggagttctcg
cacccggcgctccaggagctggtgcgccaaggacacaccgcaggactggtcacgccggac
cagctgcagattgcattcagcgaagccaagatcagccccagccggggaaaggccgtcctg
cgtgcgctcgacgaccagggaattgaggttcaggtgccaaagtccatagccgcgaagaag
acggccaagaaggcccccgcgaagaaggccgcggctgccaagaagacggagacgccggcg
aagaaggcgagtgccacgaaggccggcacgagcacgaagaccgccgcgaagaagaccacg
gacgcccaggccgacgagacgcccgcgaagaagacgagcgccacgaaggccgcctcgaag
aagaccacggccaccccgacgagcacgaaggctgcggccaagaagaccaccgcgaagaag
acggctgccaccaagacgactgcggccgccgccgcagccccgccgaagaaggtcgcgccc
gccaagcaggccgccgcgaagaaggccgcggccaagagcgccgcctccaacccgacgacc
accacggccgaggagcccgaagagggcgaggacgaggtactcggcgaggaccccaaggac
acctcccggaccaagcgtgacgagaccgacgagaagggcggcttcgtcatcagcaacgat
gacgagggcgacgcccccgcacagcaggtcgtcaccgccggcgccaccgcggacccggtc
aaggactacctgaagcagatcggcaaggtcgccctgctcaacgccgagcaggaggtcgag
ctcgccaagcgcatcgaggccggtctcttcgcggaggagaagctggccaccgccgagaag
atcgacatgaagttcaagcgcgagctttggtggatctcccaggacggcaagaacgcgaag
aaccatctcctcgaggccaacctgcgtctcgtcgtctcactcgccaagcgctacaccggt
cgcgggatgctcttcctcgacctgatccaggagggcaacctcggcctgatccgtgcggtc
gagaagttcgactacacgaagggctacaagttctccacctacgcgacgtggtggatccgg
caggcgatcacccgcgcgatggccgaccaggcccgcaccatccgcatcccggtgcacatg
gtcgaggtcatcaacaagctcgctcgcgtgcagcgccagatgctccaggacctcggccgc
gagcccaccccggaagagctggccaaggagctggacatgaccccggagaaggtcgtcgag
gtccagaagtacggtcgcgagccgatctcgctgcacacccccctcggcgaggacggtgac
tccgagttcggtgacctcatcgaggactccgaggcggtcgtgccggccgatgcggtcagc
ttcaccctcctgcaggagcagctgcactcggtcctggacaccctcagcgagcgcgaggcc
ggcgtggtctcgatgcgcttcggcctgaccgacggccagccgaagaccctcgacgagatc
ggcaaggtctacggggtcacccgggagcgcatccgccagatcgagagcaagacgatgagc
aagctgcgccacccgagccgttcgcaggtcctgcgcgactacctggactga
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