KEGG   Janibacter alittae: V1351_05750
Entry
V1351_05750       CDS       T10540                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
jai  Janibacter alittae
Brite
KEGG Orthology (KO) [BR:jai00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    V1351_05750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jai03021]
    V1351_05750
Transcription machinery [BR:jai03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     V1351_05750
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Sigma70_r1_1
Other DBs
NCBI-ProteinID: WXB77572
LinkDB
Position
1191428..1193098
AA seq 556 aa
MTAVSPRSDGAQGSLPKEFSHPALQELVRQGHTAGLVTPDQLQIAFSEAKISPSRGKAVL
RALDDQGIEVQVPKSIAAKKTAKKAPAKKAAAAKKTETPAKKASATKAGTSTKTAAKKTT
DAQADETPAKKTSATKAASKKTTATPTSTKAAAKKTTAKKTAATKTTAAAAAAPPKKVAP
AKQAAAKKAAAKSAASNPTTTTAEEPEEGEDEVLGEDPKDTSRTKRDETDEKGGFVISND
DEGDAPAQQVVTAGATADPVKDYLKQIGKVALLNAEQEVELAKRIEAGLFAEEKLATAEK
IDMKFKRELWWISQDGKNAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAV
EKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGR
EPTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVS
FTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMS
KLRHPSRSQVLRDYLD
NT seq 1671 nt   +upstreamnt  +downstreamnt
gtgactgctgtgtccccacggtccgatggggcgcagggctccctccccaaggagttctcg
cacccggcgctccaggagctggtgcgccaaggacacaccgcaggactggtcacgccggac
cagctgcagattgcattcagcgaagccaagatcagccccagccggggaaaggccgtcctg
cgtgcgctcgacgaccagggaattgaggttcaggtgccaaagtccatagccgcgaagaag
acggccaagaaggcccccgcgaagaaggccgcggctgccaagaagacggagacgccggcg
aagaaggcgagtgccacgaaggccggcacgagcacgaagaccgccgcgaagaagaccacg
gacgcccaggccgacgagacgcccgcgaagaagacgagcgccacgaaggccgcctcgaag
aagaccacggccaccccgacgagcacgaaggctgcggccaagaagaccaccgcgaagaag
acggctgccaccaagacgactgcggccgccgccgcagccccgccgaagaaggtcgcgccc
gccaagcaggccgccgcgaagaaggccgcggccaagagcgccgcctccaacccgacgacc
accacggccgaggagcccgaagagggcgaggacgaggtactcggcgaggaccccaaggac
acctcccggaccaagcgtgacgagaccgacgagaagggcggcttcgtcatcagcaacgat
gacgagggcgacgcccccgcacagcaggtcgtcaccgccggcgccaccgcggacccggtc
aaggactacctgaagcagatcggcaaggtcgccctgctcaacgccgagcaggaggtcgag
ctcgccaagcgcatcgaggccggtctcttcgcggaggagaagctggccaccgccgagaag
atcgacatgaagttcaagcgcgagctttggtggatctcccaggacggcaagaacgcgaag
aaccatctcctcgaggccaacctgcgtctcgtcgtctcactcgccaagcgctacaccggt
cgcgggatgctcttcctcgacctgatccaggagggcaacctcggcctgatccgtgcggtc
gagaagttcgactacacgaagggctacaagttctccacctacgcgacgtggtggatccgg
caggcgatcacccgcgcgatggccgaccaggcccgcaccatccgcatcccggtgcacatg
gtcgaggtcatcaacaagctcgctcgcgtgcagcgccagatgctccaggacctcggccgc
gagcccaccccggaagagctggccaaggagctggacatgaccccggagaaggtcgtcgag
gtccagaagtacggtcgcgagccgatctcgctgcacacccccctcggcgaggacggtgac
tccgagttcggtgacctcatcgaggactccgaggcggtcgtgccggccgatgcggtcagc
ttcaccctcctgcaggagcagctgcactcggtcctggacaccctcagcgagcgcgaggcc
ggcgtggtctcgatgcgcttcggcctgaccgacggccagccgaagaccctcgacgagatc
ggcaaggtctacggggtcacccgggagcgcatccgccagatcgagagcaagacgatgagc
aagctgcgccacccgagccgttcgcaggtcctgcgcgactacctggactga

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