Janibacter alittae: V1351_15160
Help
Entry
V1351_15160 CDS
T10540
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
jai Janibacter alittae
Pathway
jai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V1351_15160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jai03400
]
V1351_15160
Enzymes [BR:
jai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V1351_15160
DNA repair and recombination proteins [BR:
jai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V1351_15160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
PDDEXK_1
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
WXB76261
LinkDB
All DBs
Position
3147087..3150554
Genome browser
AA seq
1155 aa
AA seq
DB search
MSTLTPFDVTADLPTGTVLLEASAGTGKTWTIGALVARYIADGTPLEEMLVITFGRAASR
EMRERVREHLRDVHRHLADPTLTSGDEVVGLLRDGSPEEVALRERRLRDALTHFDAATIA
TTHQFCQLVLRGLGVAGDSDPHSRLVEDLSDLRDEVVDDLYVRGFAGGGTPAFTRARAGE
IARAVTENPHATLDPHSLDDGSADARMLAFAHLVRTEMARRKRRLGVLGYDDLLSHLATA
LEAEDSPARERMRQRWKVVLVDEFQDTDPVQWQVLDRAFTGHSTLVLIGDPKQAIYGFRG
GDVDTYLTASATAATRHTLGVNHRSDGPLVRSLGVLLGGSRLGDPEIVVHPVSAAKGGSR
LGTIDGTAPEGMLAPVRLRTITTERVLPPGDRSVAISVVRPLVAADCAAEITRLLARGTT
FEGRPLRAGDVAVLAHTRNQLDHVRQALTAVGLRSVIVSSDSIYSSPAAAAWLTLLEAME
LSHRPERVRAAALTPFVGASAAQLDERGEDLTEEVAHRMRTWAGLLGRRGVAAVLAAASA
DGLDARVLSRTDGERLLTDLRHVGETLHQRVVTESDGLASLTAWLRERIGAARKEERARR
LDSDADAVHLATIHSSKGLQYPIVMLPFVADRWLPTPDVLHFHREDRTRCLDIGIHSDEG
RADRLARAATEESGESLRLLYVAMTRAQSQVVTWWFPSAKNTGPSPLHRVLLGRREGQGE
VPANHPVPGDETLMSQLQEWERRGALRVELVDQPTPMTVPATAPMTDLSVRSFTRSVDTQ
WRRTSYTALTRPLDEAPRPAEELVVSEPDVTDRQDDEGSTPLAGARGATFAPSAGGEGGD
VPAPLADDQSIFDASASSPDEGDGRHLPSPMADLPVGAGFGSLVHAVLEEADVSAPDLLA
ELREHIEDQVIHWPVPDLDRDALAEALVEVVDTPLGPLAPGTSLRDIGRGDRLCEMDFEL
PLGGGDAASDAADQALLGDLAALMREYLPEGDPVLPFAEVLDDPLLGDQALRGYLTGSVD
IVLRVGGRHLVVDYKTNWLGPVDAPLTTGHYAPDALREAMNHSSYPLQAILYGVVLHRFL
RWRQPDYDPGEHFGGVLYLYLRGMAGAQTPIVDGHPTGIFSWQPPIALIEALSDLLDGRR
PVTTDGRRPVTQEAR
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagcacactgacccccttcgacgtgaccgcggacctgccgaccggcacggtcctgctc
gaggcgagcgccggcaccggcaagacgtggacgatcggcgccctcgtcgcccgctacatc
gccgacggcacgccgctggaggagatgctcgtcatcaccttcgggcgcgcggcctcccgg
gagatgcgcgaacgcgtccgcgagcacctgcgcgacgtccaccgacacctggccgacccc
accctgaccagcggcgacgaggtcgtcgggctgctgcgggacggctctcccgaggaggtc
gcgctgcgggagcgtcgcctgcgcgacgcactgacccacttcgacgcggcgacgatcgcg
accacccaccagttctgccaactcgtgctgcgcgggctcggcgtggccggcgactccgac
ccgcactcccgactcgtcgaggacctgtccgacctgcgcgacgaggtcgtcgacgacctg
tacgtgcgcggcttcgccggtgggggcacgcctgccttcacccgggcgcgcgccggcgag
atcgcccgggccgtcaccgagaacccgcacgccaccctcgacccgcactcgctcgacgac
gggtccgcagatgcgcggatgctggccttcgcccacctcgtgcgcacggagatggcccgg
cgcaagcgccgcctcggcgtgctcggctacgacgacctgctctcccacctggcgaccgct
ctcgaggccgaggactcccccgcccgcgagcggatgcgccagcgctggaaggtcgtgctc
gtcgacgagttccaggacaccgacccggtgcagtggcaggtgctcgaccgggccttcacc
gggcacagcacactcgtgctcatcggcgatccgaaacaggcgatctacggtttccgcggc
ggtgatgtcgacacctacctcaccgcctccgccacggcagcaaccaggcacacgctcggc
gtcaaccaccgctccgacggaccgctcgtacgcagcctcggggtgctgctcggtggctcc
cggctcggcgaccccgagatcgtcgtccacccggtgagcgcggcgaaggggggctcacgc
ctgggcacgatcgacggcaccgccccggaggggatgctcgccccggtccgactgcggacc
atcacgaccgagcgggtcctgcctcccggggacaggtccgtcgccatctcggtggtgcgt
cccctcgtcgccgccgactgcgccgccgagatcacccgactgctggcacggggtacgacc
ttcgagggacggccgctgcgcgcgggggacgtcgccgtcctcgcgcacacccgcaaccag
ctcgaccacgtgcgccaagcgctcacggccgtcgggctgcgctcggtgatcgtctccagc
gacagcatctactcctcccccgccgccgcggcctggctgaccctgctcgaggcgatggag
ctgagccaccgccccgagcgggtgcgcgcggcggcgctgacccccttcgtcggcgcctct
gccgcccagctcgacgagcgtggcgaggacctcaccgaggaggtcgcccaccggatgcgg
acgtgggcgggcctgctcggacgtcgcggtgtcgccgcggtgctcgcggcagccagcgcc
gacgggctcgatgcgcgggtgctctcccggaccgacggcgagcgcctgctgaccgacctg
cgccacgtcggcgagacgctccaccagcgggtcgtcaccgagagcgacggtctggcctcg
ctcaccgcgtggctgcgcgagcggatcggcgccgcccgcaaggaggagcgcgcccgccgc
ctggacagcgacgcggacgccgtgcacctcgcgacgatccactcgagcaaggggctgcag
tacccgatcgtcatgctgcccttcgtcgccgatcggtggttgccgaccccggacgtgctg
cacttccaccgcgaggaccgcacccgctgcctcgacatcgggatccactccgacgagggg
cgggccgaccggctcgcgcgggccgccaccgaggagagcggggagtcgctgcggctgttg
tacgtcgcgatgacgcgcgcgcagagccaggtggtgacgtggtggttcccgtcggcgaag
aacaccggcccctcccccctgcatcgcgtgctgctcggacggcgcgagggccagggcgag
gtccccgccaaccaccccgtccccggcgacgagaccctgatgagccagctccaggagtgg
gagcggcgcggggcgctgcgcgtcgagctcgtcgaccagcccaccccgatgaccgtcccg
gcgaccgcgccgatgacggacctgtccgtgcgctccttcacccgcagcgtcgacacgcag
tggcgccgcacgtcgtacacggcgctcacccgcccgctggacgaggcaccccgcccggcc
gaggagctcgtcgtcagcgagccggacgtcaccgaccgtcaggacgacgaagggagtacc
ccgctcgccggcgcacgtggagccacgttcgccccctccgcggggggcgaggggggcgac
gtgccggcccccctcgcagacgaccagagcatcttcgacgcctcggcttcctcccccgac
gagggggacggccgtcacctcccctcacccatggccgacctgcccgtcggggccggcttc
ggctccctcgtgcacgcggtgctggaggaggcggacgtctcggcgccggacctgctcgcg
gagctgcgggagcacatcgaggaccaagtcatccactggccggtgcccgacctcgaccgt
gatgccctcgccgaggcactcgtcgaggtggtcgacaccccgctcggtccgctcgcgcca
ggcacgtccctgcgcgacatcggccgtggcgaccggctgtgcgagatggacttcgagctg
ccgctcgggggcggcgacgccgcgagcgatgccgccgaccaggcactgctcggcgacctc
gccgcgctcatgcgcgagtacctgcccgagggcgaccccgtgctgcccttcgccgaggtg
ctcgacgacccgctgctcggggaccaggccctgcgcgggtacctcaccggctccgtcgac
atcgttctgcgcgtcggcggacgccacctcgtcgtcgactacaagacgaactggctcggc
cccgtcgacgcccccctgaccaccgggcactacgccccggacgccctgcgcgaggcgatg
aaccactcgtcctacccgctccaggcgatcctctacggggtggtgctgcaccgcttcctg
cgctggcgccagcccgactacgaccccggggagcacttcggcggggtgctctacctgtac
ctgcgcggcatggccggtgcgcagacgcccatcgtcgacggccaccccacgggcatcttc
tcctggcagccgccgatcgccctgatcgaggccctctccgatctgctcgacgggcgtcgg
cccgtcacgacggacggacggcgacccgtgacgcaggaggcacgatga
DBGET
integrated database retrieval system
