Janthinobacterium sp. 17J80-10: EKL02_00680
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Entry
EKL02_00680 CDS
T05896
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKL02_00680 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaj03400
]
EKL02_00680 (recB)
Enzymes [BR:
jaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EKL02_00680 (recB)
DNA repair and recombination proteins [BR:
jaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EKL02_00680 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_22
FCSD_central
Motif
Other DBs
NCBI-ProteinID:
QAU32802
UniProt:
A0A410UNA3
LinkDB
All DBs
Position
complement(154000..157647)
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AA seq
1215 aa
AA seq
DB search
MSQTLEPIVFPLRGSRLIEASAGTGKTWTIAALYVRLVLGHGGDDGFGRPLAPAEILVMT
FTRAATRELSDRVRARLVEAAHCFRGQAPQDHDGFLIELIASYPGQAERLQAAHRLMLAA
EAMDECAIFTIDAWCQRMLREHAFDSGSLFDEELVSNEESLFRDAVRDYWRQQVYPLGGS
ALAMLLGCWDNVDALEKAMRQLVPHAGLFDDAGDESLARLIARATNEQHAVAAAFKPGWR
ERVERMVAWVEKHRAGLHGVKMKQSTLDACFEALRTWADGPEIIVPGAAFDAAWHRLTPA
HITDCFKAKFSAEIPGDFNAIAALQAQLAAIEPLAYQIQRHAACRIAKRMMELKQRRRQF
GFADMLTRLRMALEGGNGETLARRITSQYPVALIDEFQDTSPEQYSIFNRLYRIADNPDE
LGLFLIGDPKQAIYGFRGADIHSYLDARRATAGRHYLLGTNYRSTAAVVEAVNHLFLHAE
GAPAGRDGQCGAGHAQGAFRFRRGGENPLPFEPVGAQGRAEQLVETGGAVAAMTFWCSDS
PDLKSDGYREHFSALCAERIVALLDDPAAGFAEADALTPLKPADIAVLVRDRKEAAAVRR
ALLRRGVASVYLSDKDSVFESTVAADLLTWLQAVANPLDAGCARAAFATRSAGLSLEALA
HLAADDLAWEARVEQLKALRLVWQRQGVLAMLRRFIHELDLPARLLRETGGERSLTDLLH
LAEMLQAASQNLDGEHALIRWLAEQIANDGEGGDERILRLESDAELVQVITVHKSKGLEY
PLVFLPFAVSAKPVNRANRSFFFHTGEDGARRVDFARTEEAREQLDRARLDEDLRLLYVA
LTRARHALWLGVASLKDRIHDSAMGYLLGGGEAIDGAQLMARLQAMRGDCAAISLLDATA
DPGFGPLSRRPRRPPLQNAPPYAASFERHWKIASYSSITRELGSAPVPATPLAEKLAEDD
DLRSFGKLQDTAWHRFPRGSLPGQFLHAQLEWMANEGFGIVDDVTFESRLRARCERAGWG
HRQDDAVAWLRAIAQTPLPPLGAALRDLDGAMPETEFWFPAHSVATGALDALCQRHLLDG
IARASLSERELHGMLRGFKDLVFEHAGRYWVLDYKSNALAPTDAGYHRQALAEGMAACRY
DVQGAIYLLALHRLLKSRLGAEYDPQAQLGGALFYFLRGINNPETRGCYHLPADVVLLEA
LDALLPVPAATEDFA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacacttgagcccatcgttttcccgctgcgcggctcgcgcctgatcgaagcc
agcgccggcaccggcaagacctggaccatcgccgcgctgtatgtgcgcctggtgctcggg
catggcggcgacgatggcttcggccggccgctggcgccggcggaaatcctggtgatgacc
ttcacgcgcgccgccacccgcgagctgtccgaccgcgtgcgtgcgcgcctggtggaagcg
gcgcactgcttccgtggccaggcgccgcaggaccatgacggtttcctgatcgaactgatc
gcatcctaccccggccaggccgaacgcctgcaggcggcgcaccgcctgatgctggcagcc
gaagcgatggacgaatgcgccatctttaccatcgatgcctggtgccagcgcatgctgcgc
gagcatgccttcgacagcggcagcctgttcgatgaagaactggtcagtaacgaggaaagc
ctgtttcgcgatgccgtgcgcgattactggcgccagcaggtgtatccgctgggcggcagc
gccctggcgatgctgcttggctgctgggataacgtcgatgcgctggaaaaggcgatgcgc
cagctggtgccgcatgcaggcctgttcgatgacgccggcgacgaaagcctggcgcgtctg
atcgcgcgcgctacaaatgagcagcatgcggtggcggcggcgttcaagcctggctggcgc
gagcgcgtcgaacgcatggtggcgtgggtggaaaagcatcgcgccggactgcacggcgtc
aagatgaagcagtcaacgctggacgcatgtttcgaggccttgcgcacctgggctgacggc
cccgagatcatcgtgcctggcgcggccttcgacgcggcctggcacaggctgacgccggcg
catatcaccgattgtttcaaggcgaaattttctgccgaaattcccggcgattttaacgcc
atcgctgcgctgcaggcgcagctggcggcgattgagccgctggcctaccagatccagcgc
catgccgcctgccgcatcgcaaagcgcatgatggaactcaagcagcgccggcgccagttc
ggttttgccgacatgttgacgcgcctgcgcatggcgctggaaggcggcaatggcgaaacg
ctcgcgcgccgcatcaccagccagtacccggttgcgctgatcgatgaattccaggatacc
tcgcccgagcagtacagcatcttcaaccgtctttatcgcatcgccgataacccggatgag
ctgggcctgttcctgatcggcgaccccaagcaagccatttacggcttccgcggcgccgac
atccacagctacctcgatgcgcgccgcgctaccgccggccggcattatctgcttggcacc
aattaccgctcgacggcggcagtcgtcgaggccgtcaaccacctctttctgcatgccgaa
ggtgcgccggccgggcgggatgggcagtgcggcgcgggccacgcgcaaggcgccttccgc
ttccgccggggtggcgaaaaccccttgccgttcgaaccggtcggcgcccaaggccgagcc
gagcagcttgtcgagaccggcggcgcagtcgccgccatgacgttctggtgcagcgactcg
cccgacctgaaaagcgacggctaccgcgagcatttttccgccctgtgcgccgagcgcatc
gtggccttgctcgacgaccctgccgccggctttgccgaagcggacgcgctgactcccctg
aaaccggccgatattgccgtgctggtgcgcgaccgcaaggaagccgcggcggtgcgccgg
gcgctcctgcgccgcggcgtcgccagcgtctacctgtcggacaaggactccgtgttcgaa
agcacggtggctgccgatttgctgacctggctgcaggcggtcgccaatccgctcgacgcc
ggctgcgcgcgtgcggctttcgccacgcgcagcgctggcctgtcgctggaggcgctggcg
catcttgccgccgacgacctggcgtgggaagcgcgcgtggagcaattgaaagccctgcgc
ctggtctggcaacgccagggcgtgctggccatgctgcgccgcttcatccacgaactcgat
ctgccggcccgcctgctgcgtgaaaccggcggcgagcgcagcctgaccgacctgctccac
ctggcggaaatgctgcaggcggccagccagaacctggatggcgagcatgccctgatccgc
tggctggccgaacagattgccaatgacggcgaaggcggcgacgagcgcatcctgcgcctg
gaaagcgatgccgaactggtgcaggtgattaccgtgcacaagtccaagggcctggaatac
ccgctggtgtttttgccttttgccgtcagcgccaagcctgtcaaccgcgcgaaccgcagc
ttctttttccataccggcgaagacggcgcgcgccgcgtcgatttcgcccggactgaagaa
gcgcgcgagcagctggaccgcgctcgtctggacgaagacttgcgcctgttgtacgtggca
ttgacgcgcgcgcgccatgcgctctggctgggcgtggcgtcgttgaaggacaggatccac
gacagcgccatgggctatctgctgggcggcggcgaggcgatcgacggcgcgcaactgatg
gcgcgcctgcaggcgatgcgcggcgattgcgccgccatcagcctgctcgatgccactgcg
gatcccggcttcggcccgctgtcgcgccggccgcgccggccgcccctgcagaatgccccg
ccgtatgcggccagcttcgagcgccactggaaaatcgccagttattcctcgatcacccgc
gaactcggcagcgccccggtaccggccacgccgctggcggaaaagctggcggaagacgac
gacctgcgcagtttcggcaagctgcaggacactgcctggcaccgctttccgcgcggctcg
ctgcccggccagttcctccacgcgcaactggaatggatggccaacgaaggattcggcatc
gtcgacgacgtcaccttcgagtcacgcctgcgcgcgcgttgcgagcgcgcagggtggggc
cacaggcaggatgacgccgtggcctggctgcgggcgattgcgcaaacgccgctgccgccg
ctgggcgctgccctgcgcgacttggacggggccatgccggaaaccgaattctggttcccg
gcacacagcgtcgccactggcgcgcttgatgcgctgtgccagcgtcacctgctcgacggc
atcgcccgcgcatccctgtcggagcgcgaattgcatggcatgctgcgcggcttcaaggac
ttggtgttcgaacatgccgggcgctactgggtgctggattacaagtccaatgcgctggcg
ccgaccgatgcgggctaccaccgccaggcccttgccgaaggcatggctgcctgtcgttac
gacgtgcagggggcaatctatctgctggcgctgcaccgcctgctgaagagccgcctgggc
gcggaatacgatccccaggcgcaactgggcggagcgctgttttacttcctgcgcggcatc
aacaaccccgagacgcgcggctgttaccacttgccggcggatgtcgtcctgctggaggcg
ctggatgccttgctgccggtgccggccgccacggaggattttgcatga
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