Janthinobacterium sp. 17J80-10: EKL02_00685
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Entry
EKL02_00685 CDS
T05896
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKL02_00685 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaj03400
]
EKL02_00685 (recC)
Enzymes [BR:
jaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EKL02_00685 (recC)
DNA repair and recombination proteins [BR:
jaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EKL02_00685 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QAU32803
UniProt:
A0A410UN91
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All DBs
Position
complement(157644..161129)
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AA seq
1161 aa
AA seq
DB search
MPSNLSPGFLAIHGNQLEQLRSAVFGWLRSNPLAPLEQEIILVQSNGVAEWLKIALAEEM
GVCASTRVTLPARFLWDAYRGMLGPQQVPYRSALDESPLTWRLMALLPDLLARPAFAPLR
HFLADGDPERRLQLALRLADLFDEYQVYRADWLADWAGGNDQLRRAAGEAAPLASDQRWQ
AELWREVLASLPEEERTSGRASVHQRFVAALQAGEASVSRLPRRVVVFGVSALPYQTLQA
LGALAAKMQVVVAVPNPCRFYWGDIIAGRDLLKAGRRRQEMREGRDLAALPLEELHAHSH
PLLAGWGRLGRDFVRMLDEFDDAQATREHFSSLRIDLYSEGEGDCLLQQVQAAIRDMLPL
DEHPRAEVAPDDRSIEFHIAHSAQREVEILHDRLLAMFADDATAVPLRPRDVVVMVPDIE
VFAPAIAAVFGQYPRHDARFIPFEIADVTERQVNPLLVALEWLLRLPQQRCLQSEVRDLL
DVPALAAKFGIAAADLPRLAQWIDGAGVRWGLDTEHRAGLGLAPAGEQNAWIFGIRRMLL
GYASGDDASYGGIEPYAEVGGLDAALAGSLAAFIEKLLIWREALAQDVTPQAWGARARLL
LASFFDAREERDRLTIASLEQALACWLEDCESGGFAATVPLAVVREAWLGAIDAPTLAQR
FVSGGVTFCTLMPMRAVPFRAVCLLGMNDGDYPRRAHHADFDLLALPGLARPGDRSRRDD
DRYLMLEALLAAREKLYISWVGRNVRDNSEQPPSVLLSQLRDYLARGWDLDLRQLTTEHP
LQPFSRRYFEEGGLLTFAREWRVAHEDAQGRDAAAATQGELLLGPAADAAGSAAQELPAS
VRLGDLARFLRQPVTYFFRHRLQVVFADSALVGQDEEPFGLNALEKYGIAAMLLDDDGQQ
EAMGEVEAGLRERTARLARQGVLPIGMMGRYWQDRLVRELAPVRQAWLALCAKFPDAAGK
LPVAMAHEGMRLDDWIDKLRGDGRQTAWLEQNPGALTRSVQKKIMPRPEKLLDAWVRQLA
AAVAGQPVTGYLVGLDATLRLAPLEAEASHQALQALLELWRQGLRNPLPVARKTALKLCE
GDDDKLRETYDGRRDHQTGNFQKGEVADPCLARLWADFAALEAEPEWRACALALYQPLVA
WCAGAVEVILHDDEQQPGEAA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaacctgagcccaggatttctcgccatccacggcaaccagctcgaacaattg
cgcagcgccgtattcggctggctgcgcagcaacccgctggcgccgctggagcaggaaatc
atcctggtgcaatccaatggcgtggccgagtggctgaagatcgcccttgccgaggaaatg
ggcgtatgcgcttccacgcgcgtgacgctgccggcacgatttctgtgggacgcgtatcgc
ggcatgctcgggccgcaacaggtgccgtaccgctcggcgctggacgagtcgcccctgacc
tggcgcctgatggcgctgctgccggacttgctggcacgcccggcctttgcgccgttgcgc
cattttctcgccgatggcgatcccgagcggcgcctgcagctggcgctgcgcctggctgac
ctgttcgatgaataccaggtgtaccgggccgactggctggcggactgggccggcggcaac
gaccagttgcgcagagccgctggtgaagcagcgccgctggcatccgaccagcgctggcaa
gcagaattgtggcgcgaagtgctggccagtctgccggaagaggaacgcaccagcgggcgc
gccagcgtgcaccagcgttttgtcgcggccctgcaggccggcgaggcgtccgtttcccgc
ctgccgcgccgggtcgtggtgttcggcgtgtctgccttgccctaccagacgctgcaggcg
ctgggcgccctggcggcaaagatgcaagtggtggtggcggtgcccaacccctgccgcttt
tactggggcgacatcatcgccgggcgcgatctgttgaaagccggccggcgccgccaggaa
atgcgcgagggccgcgacctggccgcgctgccgctggaagaattgcatgcgcacagccat
ccgctgctggcaggctgggggcgcctcgggcgcgacttcgtgcgcatgctcgacgaattc
gacgacgcccaggccacccgcgaacatttttccagcctgcgcatcgacctctacagcgaa
ggagagggcgattgcctgctgcagcaggtgcaggcggcgatccgcgacatgctgccgctg
gatgagcacccgcgcgccgaagtcgcgccggacgaccgctcgatcgaatttcacattgcc
cacagcgcccagcgcgaagtcgagattctccatgaccgcctgctggcgatgttcgccgac
gatgccactgccgtgccgctgcggccgcgcgatgtcgtggtgatggtgccagatatcgaa
gtctttgcgccggcgatcgctgcagtgttcggccagtacccgcgccacgatgcgcgtttc
atccccttcgaaatcgccgatgtcaccgagcgccaggtcaacccgctgcttgtggccctc
gaatggctgctgcgcctgccgcagcagcgctgccttcaaagcgaagtgcgcgacctgctc
gacgtgccggcgcttgctgccaagttcggcattgctgcggcggatttgccgcgcctggcg
caatggatcgatggcgccggcgtgcgctggggcctggataccgagcatcgcgccggcctg
ggtctggcgccggcgggcgaacagaatgcctggatattcggcattcgccgcatgctgctc
ggctatgccagcggtgacgatgccagctacggcggcatcgagccgtatgccgaagtgggt
ggcctggacgccgcgctggcgggctccctggcggccttcatcgaaaagctgctgatctgg
cgcgaggcgttggcacaggatgtcacgccgcaggcctggggcgcgcgcgcacgtctgctg
ctggccagcttctttgacgcccgcgaggagcgcgaccgcctcaccattgccagtctcgaa
caggcgctggcgtgctggctggaagattgtgaatccggcggctttgcggcgaccgtgccg
ctggcggtggtgcgcgaagcctggctgggcgccatcgacgcgcccacgctggcgcagcgc
ttcgtctccggcggtgtgacgttctgcaccctgatgccgatgcgcgcggtgccttttcgc
gccgtgtgcctgctcggcatgaacgacggcgactatccgcgccgcgcccaccatgccgac
ttcgacttgctggcgctgcctggtcttgcgcgcccgggcgaccgctcgcggcgcgacgat
gaccgctacctgatgctggaagcgctgctggccgcgcgcgaaaagctgtacatcagctgg
gtaggccgcaacgtgcgcgacaacagcgagcagccgccttcggtgctgctgtcgcaactg
cgcgattacctggcgcgcggctgggacctcgacttgcggcaactgacgaccgagcacccg
ctgcagcccttcagccgccgctacttcgaagaaggcggcttgctgacctttgcacgcgaa
tggcgcgtggcccatgaggatgcgcagggacgcgacgctgccgcggccacgcagggcgaa
ctgctgctggggccggcggcggatgccgcaggttcggctgcgcaggagctgccggccagc
gtcaggctgggcgatctggcgcgatttttacgccagcctgtgacgtattttttccggcac
cgcctgcaggtcgtgttcgctgacagtgccctggtgggtcaggacgaggaaccgttcggc
ctgaacgcgctggaaaaatatggcatcgccgcgatgctgctggacgacgacggccagcag
gaagccatgggcgaagtcgaggcgggcttgcgcgagcgcactgcgcgcctggcgcgccag
ggcgtgctgccgatcggcatgatgggccggtactggcaagaccggctggtgcgcgaactt
gcgccggtgcgccaggcctggctcgcgctgtgcgcgaaatttcctgatgctgccggcaag
ctgccggtggcaatggcgcacgagggcatgcgcctggatgactggatcgacaagctgcgc
ggcgatgggcgccagactgcgtggctcgaacagaaccccggcgcgctgacgcgcagcgtg
caaaagaaaatcatgccgcgcccggaaaagttgctggatgcttgggtgcgccagctggcc
gctgcggtcgccgggcagccagtcaccgggtacctggtgggcctggatgccaccttgcgc
ctggcgccgctggaagccgaggcctcgcaccaggcgctgcaagccttgctggaattgtgg
cggcaaggcttgcgcaatcccttgccggtggcccgcaagaccgcgctgaaattgtgcgaa
ggcgacgatgacaagctgcgcgaaacctatgacggccggcgcgaccatcagaccggcaat
ttccagaaaggcgaggtcgccgacccttgcctggcgcgcctgtgggcagattttgccgcg
ctcgaggccgagccggagtggcgcgcctgcgccctggcgctgtatcagccgctggttgcc
tggtgcgccggcgccgtcgaagtgatcctgcacgacgatgagcagcaaccgggagaggca
gcatga
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