Janthinobacterium sp. 17J80-10: EKL02_01000
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Entry
EKL02_01000 CDS
T05896
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKL02_01000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaj03400
]
EKL02_01000
Enzymes [BR:
jaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKL02_01000
DNA repair and recombination proteins [BR:
jaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EKL02_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
HypA
Motif
Other DBs
NCBI-ProteinID:
QAU32861
LinkDB
All DBs
Position
complement(244324..246474)
Genome browser
AA seq
716 aa
AA seq
DB search
MEHCILKIALDTPLDSCFDYRWQLVTGAGALPQPGHLAIVPFGRREVVGVIVAVSEHSEV
SPEKLKDALAVHVQIPPLSRAWLALCQFAADYYHRPLGEVAVPGLPKNLRAIKTTALDKA
LKKLHTPVTAQVPAKASRAARARAKTADAEVAVVAVAASDMALEEAAVVPEVPAAPCLNP
PQQAAVDAIAGAAGFAPFLLYGVTGSGKTEVYLQAAARILARAQPEEAPSQVLILVPEIN
LTPQWLANVQARFPHLAIAMLHSGLAEGERLAHWLSAHHGRAQIVLGTRLAILASLPHLK
LLVVDEEHDPSYKQQEGLRYSARDLAVWRAHQLGIPVVLGSATPSLESWQHVQSGRYRKL
ELRERAVPDAVLPKVRLIDMERDKPTGGLTATLVKALKLRLERGEQSLLFLNRRGYAPVI
ACEACGWISNCAHCSAYMVLHKLDHRLRCHHCSCEMRIPRNCPTCGDVDLQPLGRGTQRV
EEGLQQMFPTARILRIDADSTRLKGSAQAAFSAVHQGEVDILVGTQMVAKGHDFQNLTLV
GVLNPDTALFSQDYRAAERLFAQLMQVAGRAGRRAQKADGSPSEVWIQTRYPQHPLYGAL
MAHDYERFAQGQLEERGQADLPPFIFQALLRAEARELQLALEFLHASSQLLEYPGITIHD
PIPMSMTRVANVERAQLLVESGSRPALQAFLNDWLPLLREIRPRVKWSLEVDPVDI
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtggaacactgcatcctcaaaattgcactcgatacaccacttgacagttgtttcgattat
cgttggcaacttgtcacaggggcgggggcgctgccccagccgggacatctggccattgtg
ccgttcggtcgccgcgaagtggtgggggtcatcgtcgcagtgagcgaacacagcgaggtg
tcgccggaaaagctcaaggatgcgctggcagtgcacgtgcagattccgccgttgtcacgg
gcctggctggctttgtgccagttcgctgccgattattaccatcggccgctgggcgaggtg
gcggtgccgggcttgccgaaaaacttgcgcgccataaagaccacggcgctggacaaggcc
ctgaaaaaattgcacacgccggtgacggcgcaggtaccggcaaaggcatccagagcagcc
cgggcgcgcgcaaaaacggccgatgcagaggttgccgttgtggcggttgcggcgagcgac
atggcccttgaggaagcggccgtggtgcccgaagtgcctgccgcaccatgcctgaacccg
ccgcagcaagccgcggtggacgcgattgccggcgccgcaggatttgcgcccttcctgctg
tatggcgtcaccggcagcggcaagaccgaggtgtacctgcaggcggccgcacgcatcctg
gcgcgggcgcagccggaagaggcgccctcgcaagtgctgatcctggtgccggagattaac
ctgacgccgcaatggctggccaacgtgcaggcgcgttttccgcacctggcgattgcgatg
ctgcacagcggcctggccgagggcgagcgcctggcgcactggctgtcggcacaccatggt
cgcgcgcaaatcgtgctgggcacgcgcctggcgatcctggcatcgttgccgcacctcaag
ctgctggtggtcgacgaagagcacgacccgtcctacaagcagcaggaaggcttgcgctat
tcggcgcgcgacctggccgtgtggcgggcgcaccagctcggcattcccgtggtactgggg
tcggccacgccttcgctggaatcctggcaacatgtgcaatcagggcgctaccgcaagctg
gagttgcgcgagcgggccgtgcccgacgccgtgctgccgaaggtgcgcctgatcgacatg
gagcgcgacaagccgacgggcgggctgaccgccaccctggtcaaggcgctgaagctgcgg
ctcgagcgcggcgagcaatcgctgctcttcctgaaccggcgcggctatgcaccggtgatc
gcctgcgaggcgtgcggctggatcagcaattgcgcgcattgcagcgcctacatggtcttg
cacaagctggaccaccgcctgcgctgccaccattgcagctgcgagatgcgcatcccgcgc
aattgcccgacctgcggcgatgtcgacctgcagcctctggggaggggcacgcaacgcgtg
gaagagggtttgcagcagatgttcccgacagcgcgcatcctgcgcatcgatgccgattcg
acgcgcttgaaaggcagcgcccaagcggcgttcagcgcggtgcaccagggcgaggtggat
atcctggtgggcacgcagatggtggccaaggggcacgatttccagaacctgacgctggtg
ggcgtgctcaatccggatacggcgctgttttcgcaggattaccgcgccgcagaacgcctg
tttgcgcaattgatgcaggtggcagggcgcgccgggcggcgcgcgcaaaaggcggatggc
agccccagcgaagtgtggatccagacacgctatccgcagcatcccctgtatggcgcgttg
atggcacatgactacgagcgctttgcccagggccagctggaagagcgtggccaggccgac
ttgccgccatttatcttccaggcgctgttgcgcgcggaagcgcgcgaactgcagctggcg
ctggaattcctgcatgcctcgagccagcttctggaatatccgggcatcaccatccacgac
ccgattccgatgtcgatgacccgggtcgccaatgtcgagcgggcgcaactgctggtggag
tccggttcgcgtccggcattgcaggcattcctgaatgactggctgccgctgctgcgcgag
atcaggccacgcgtcaaatggtcgctcgaagtcgatccggtcgatatctag
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