Janthinobacterium sp. 17J80-10: EKL02_02075
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Entry
EKL02_02075 CDS
T05896
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jaj03009
]
EKL02_02075 (dbpA)
Enzymes [BR:
jaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EKL02_02075 (dbpA)
Ribosome biogenesis [BR:
jaj03009
]
Prokaryotic type
rRNA helicases
EKL02_02075 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
VirE1
EIF3I
Motif
Other DBs
NCBI-ProteinID:
QAU33056
UniProt:
A0A410UP06
LinkDB
All DBs
Position
485420..486805
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AA seq
461 aa
AA seq
DB search
MNDTAFASLPLAPALLANLESLGYLEMTPIQAKTLPVAIEGRDLIAQAKTGSGKTAAFGI
SILRKLNPTWFAIQALVLCPTRELADQVANELRRLARFADNIKVLTLCGGAPMRPQMASL
EHGAHIVVGTPGRIRDHLGRGSINLGTVQTLVLDEADRMVDMGFQEEIAGIVSACPSRRQ
TLLFSATYPDDIRKVSSPFLIDPVEVSAEVQHEAGKIEQRFYEIGYEERNAAVARLLRHF
KPVSTIAFCNTKIHCRELADELQAQGFSALALHGDLEQRERDEILVLFANRSCSVLVATD
VAARGLDIQSLSAVINVDVSKDTEVHVHRIGRTGRGQEKGLALSLCAPNEKKWVKLIEEY
QHQPAEWHELATLEAGQGKALQAPMVTLCIQGGKKDKLRPGDLLGALTGDAGLTKEQVGK
INVFEFVTYVALDRHIADQAYERLSSGNIKGRNFRMRFITL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaccgcatttgccagcctgccgctggcgccggccctgctggccaacctcgaa
tcgctcggctaccttgagatgacgccgatccaggccaagaccctgccggtggcaatcgaa
ggccgcgacctgatcgcccaggccaagaccggcagcggcaagaccgccgcgttcggcatc
agcatcctgcgcaagctcaatccgacctggtttgccatccaggcgctggtgctgtgtccg
acgcgcgagctggccgaccaggtggccaatgaattgcgccgcctggcgcgctttgccgac
aatatcaaggtgctcacgctctgcggcggcgcgccgatgcgcccgcaaatggcgtcgctg
gaacatggcgcgcatatcgtggtcggcacgccggggcgtattcgcgaccacctgggccgc
ggcagcatcaacctgggcacggtgcaaacgctggtgctggatgaggccgaccgcatggtc
gacatgggctttcaggaagaaatcgccggcattgtcagtgcttgtccctcgcgccgccag
accctgctgttttccgcgacgtatccggacgatatccgcaaggtgagcagcccattcctg
atcgatcccgtcgaagtctccgccgaggtccagcacgaggccggcaagatcgagcagcgc
ttttacgagatcggttatgaagagcgcaatgcggcggtagcgcgcctgctgcgccacttc
aagccggtgtcgacgattgccttttgcaataccaagatccattgccgcgaactggccgat
gagctgcaggcgcagggcttttccgcgctggcgctgcacggcgacctggagcagcgtgaa
cgcgatgaaatcctggtgctgtttgccaaccgcagctgctcggtgctggtggccaccgac
gtcgccgcgcgcgggctggatatccagtctctcagcgcagtgatcaatgtcgatgtgtcg
aaagataccgaagtgcacgtgcaccgcatcggccgcaccggccgcggccaggaaaagggc
ctggcgctgtcgctgtgcgcgcccaatgaaaagaagtgggtcaagctgatcgaggaatac
cagcaccagccggccgagtggcatgaactggccacgctggaagccggccagggcaaggcg
ctgcaggcgccgatggtgacgctgtgcatccagggcggcaagaaagacaagctgcgcccc
ggcgacttgctgggcgcgctgaccggcgacgccggtctgaccaaggagcaggtcggcaag
atcaacgtgtttgaattcgtcacttacgtcgcgctggaccggcacattgccgaccaggcg
tacgagcgcctttccagcggcaatatcaagggccgcaatttcaggatgcgctttattacc
ctctga
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