Janthinobacterium sp. 17J80-10: EKL02_03880
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Entry
EKL02_03880 CDS
T05896
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
jaj
Janthinobacterium sp. 17J80-10
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jaj03019
]
EKL02_03880 (rapZ)
Messenger RNA biogenesis [BR:
jaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EKL02_03880 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_16
AAA_22
AAA_28
FtsK_SpoIIIE
AAA_29
SLFN-g3_helicase
T2SSE
CoaE
Motif
Other DBs
NCBI-ProteinID:
QAU33390
UniProt:
A0A410UPW1
LinkDB
All DBs
Position
complement(871146..872012)
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AA seq
288 aa
AA seq
DB search
MRIILITGISGSGKSVCLNALEDAGYFCVDNLPPTLLRALVDTRIAEESAASLAVAVDAR
SAASLAGLPADIKQLKDEGHDVKVLFLTAKTESLINRFSETRRSHPLSHRVRADQNPSDR
PTLTECILHEREMLGSIEKLGHVIDTSGLSANKLRAWVKELVESDKAPLTVLFESFAFKF
GVPLDADLVFDVRILPNPYYDLTLRPFTGRDAPVIAFLQGQPEATDLYTDIRSFVEKWLP
AFKNDNRSYLTVAIGCTGGQHRSVYMVEQLARHFQKTERVVLRHRELA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatactgatcaccggcatctccggctccggcaaatccgtttgcctgaacgcc
ctcgaagacgcgggctatttttgcgtcgacaacctgccgccgacgctgttgcgcgcgctg
gtcgacacccgcattgcagaagaatccgctgccagcctggcagtggcggtcgatgcgcgc
agcgccgcctcgctggccggcttgccggccgatatcaagcaattgaaggatgaaggccac
gacgtcaaggtgctgtttttgaccgccaagaccgaatcgctgatcaaccgcttttccgaa
acccgccgcagccatccgctgtcgcaccgcgtgcgcgccgaccagaacccgagcgaccgc
ccgaccctcaccgaatgcatcctgcacgaacgcgaaatgctgggctcgattgaaaagctc
ggccacgtcatcgatacgtccgggctgtcggccaacaagctgcgcgcctgggtcaaggaa
ctggtggaatccgacaaggcgccgctgaccgtgctgttcgaatcctttgccttcaagttc
ggcgtgccgctcgatgccgacctggtcttcgacgtgcggatcctgcccaatccctattac
gacctgacactgcggcctttcaccggccgcgatgcgccggtgattgccttcctgcagggg
caaccggaagccaccgacctgtacacggacattcgcagttttgtcgaaaaatggctgccg
gccttcaagaacgacaaccgcagttacctgacggtggccatcggttgcaccggcggccag
caccgctccgtctacatggtcgaacaactggccaggcatttccagaaaaccgagcgggtg
gtgttgcgccatcgcgagctcgcctga
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