Janthinobacterium sp. 17J80-10: EKL02_04595
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Entry
EKL02_04595 CDS
T05896
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EKL02_04595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
jaj02022
]
EKL02_04595
02035 Bacterial motility proteins [BR:
jaj02035
]
EKL02_04595
Two-component system [BR:
jaj02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
EKL02_04595
Bacterial motility proteins [BR:
jaj02035
]
Pilus system
Twitching motility proteins
EKL02_04595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_28
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QAU33518
LinkDB
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Position
1019948..1021471
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AA seq
507 aa
AA seq
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MSVPRILVIDDEPDLRELVEITLLKMGLDVDSADRLATARALLQQHEYALVLTDMRLPDG
MGIELVREVTGACRNTPIAVITAFGSADNAVTALKAGAFDYLSKPVGLDQLRLLVQSALR
ISTVAGGGGKAPAVAGGGISLRLMGQSSLMQDLRTQIARLARSMAPIAITGESGSGKELA
ARDIHAQSARADKAFIAVNCGAIPESLMEAEFFGYRKGAFTGAAEDRDGFFQAANGGTLL
LDEVADLPLAMQVKLLRAIQERRVRKVGATVEEPVDVRLISATHQDLAECVEKGKFRQDL
YYRLNVIELRLPSLRERLEDVGLLAETILAKLAGPGMARVTLAPAALAALRGYSFPGNVR
ELENILERAMAFANDDVIEVADLALKAAGMVPSGLAAAAPAAAPEVAEPMLQSAESTFAG
DAPADTVSVRFHMPPTPDVAEPLGAAVAELPPLPASLPDHLDQVEREIICRALAQTRFNR
TQAAELLGISFRQLRYRMQRLSIHEPE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaccccgcatactggtgatcgacgacgagcccgatttgcgcgagctggtcgag
ataaccttgctcaaaatgggcctggatgtggatagtgccgatcgcctggcaaccgcgcgc
gcgctgctccagcagcacgaatatgcgctggtgctgaccgacatgcggctgccggacggc
atgggcattgagttggtgcgggaagtgactggtgcctgccgcaataccccgattgccgtc
attaccgctttcggcagtgccgacaatgccgtcaccgccctgaaagccggcgcttttgat
tacctgagcaaaccggtcgggctggaccagttgcgtttgctggtacagtcggctttgcgc
atcagtacagttgcaggggggggcggcaaggcgcccgcggttgccggcggcggcatcagc
ctgcgcctgatggggcaatcctcgctgatgcaggatttgcgtacgcaaatagcgcgtctg
gctcgcagcatggcaccgattgccatcaccggcgagtccggcagcggcaaggagctggcg
gcgcgcgatatccatgcgcaaagcgctcgtgccgacaaggcattcattgccgtgaattgc
ggcgccatacccgaatccctcatggaggcggaattttttggctatcgcaagggcgcgttt
accggagcggccgaggatcgcgatggttttttccaggcagccaatggcggtacgctcctg
ctggacgaggtggcggacttgcccctggcaatgcaggtaaaactgttgcgtgccattcag
gagcggcgcgtgcgcaaggtcggcgcgacggtcgaagagccggtcgatgtgcgcttgatc
agtgcgacgcaccaggatctggcggagtgcgttgaaaaaggcaagtttcgccaggatttg
tattaccgtctgaacgtgattgaattgcgcctgccatcgctgcgggagcggctggaggat
gtcggtttgctggccgagacgatcctggcaaaactggcagggccaggcatggccagggtg
acactggcgccagccgcactcgcagcgctgcgcggctactctttcccgggcaatgtgcgc
gaactggaaaatattctggaacgcgccatggcatttgccaatgacgatgtcatcgaagtg
gccgacctggccttgaaagctgccgggatggtgccttccgggcttgctgccgcagcgccg
gcggccgcgcccgaggtcgcggaaccgatgctgcagtcagctgagtcaacgtttgccggg
gacgctcctgccgataccgtatcggtacgcttccacatgccgccaacgcccgacgtggcc
gagccgctcggggcggccgtagccgagttgccgcccttgccggccagcctgccggatcat
ctggaccaggtcgagcgcgaaatcatttgtcgcgcgcttgcgcagacccgtttcaatcgt
acgcaagccgcggaattgcttggaattagctttcgccagttgcgttaccgtatgcagagg
ttaagtattcatgaaccggaatga
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