Janthinobacterium sp. 17J80-10: EKL02_04685
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Entry
EKL02_04685 CDS
T05896
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jaj03016
]
EKL02_04685
Enzymes [BR:
jaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EKL02_04685
Transfer RNA biogenesis [BR:
jaj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EKL02_04685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
QAU33535
UniProt:
A0A410UQA8
LinkDB
All DBs
Position
1038400..1040496
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AA seq
698 aa
AA seq
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MNLFFEESGDFKAGTVLSQQGEAYQVELASGKRSKVKAKDVLLQFASPEPAQLLQQAQAL
AAELELDFLWEVAGQDEFGFAELGAEYFGHAPLPHEAASLLLKLHGAPMYFYRKGKGRYK
AAPEASLKAALAGLEKKKQQALLQVQYVDELKAGRLPEALRGQVRQLLFKPDKNSIEYKA
LEAACDEMQTSPARLMLAVGGMASPKDLHFSRFLLEHFPKGSGFPAVQVPPLPDLPVAAV
EAFSIDDVTTTEIDDALSVTALEDGKLKIGIHIAAPALGIRRNDAIEAIARQRMSTVYMP
GEKITMLPDDVVGAFTLDAGAARPAVSLYATVDPQDWSVLATETRVEMVPIVANLRHNEL
DEQVTEEALASGTGDYPHRRELSLLWQWAQVLERARMAKRESFGLKPEQANRVDFNFYVE
DDVVTIVRRKRGAPLDKIVAELMIFANSSWGKLMHEHGVPGIYRCQGGGNGGWAARMQVR
MQTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQILACIEHGVTAPLAAPFKPRDADLFA
IVSAFDAAYGAYADFQTNMERYWCLRWLEQNEARRVDAVVLKEEVLRLVDIPLIVRLPGM
PAAPRGSQVRLDLLRWDEVELTVEARLIEVLPMEADAAIAEEVLDEAILDEPAEALVEAE
AEVEADSEMTTKPLEAGPGGDVNSVAAATDSASEADNR
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattttttgaagaatccggcgatttcaaggcgggtaccgtcctctcccagcaa
ggcgaggcttaccaggtcgaacttgccagcggcaagcgaagcaaggtcaaggccaaggat
gtgctgctgcaattcgcttcgcccgagccggcgcagctgttgcagcaggcgcaggcgctg
gctgccgagctcgaactggacttcctgtgggaagtggcgggccaggatgaattcggcttc
gccgaactgggcgcagagtattttggccatgcgccgctgccgcacgaagctgccagtctt
ttgctgaaactgcatggcgcccccatgtatttttaccgcaagggcaaggggcgctacaag
gccgcgccggaagcttccctgaaagccgcactcgccggcctggaaaaaaagaagcagcag
gcgttgctgcaggtacagtatgtcgacgaattgaaggctgggcgcttgcccgaggcattg
cgcgggcaagtacgccagctgctgttcaagccggacaagaacagcatcgaatacaaggcg
ctggaggctgcctgcgacgaaatgcagaccagtccggcgcgcctcatgctggcggttggc
ggcatggcctcgcccaaggacctgcacttttcccgattcctgctggagcattttccgaag
gggagcggttttcccgctgtgcaggtgccgccattgcctgatttgcctgttgcagctgtc
gaggcgttttccatcgatgacgtgactaccactgaaatcgacgacgccttgtcggtgacg
gcgctggaagatggcaaactgaaaatcggcattcatatcgccgcgccggcactgggcatc
cgtcgcaatgatgcgatcgaggcgattgcgcggcagcgcatgtccacggtctacatgccg
ggcgaaaaaatcaccatgctgccggacgacgtcgtgggggcgttcaccctggacgcgggt
gcagcccgtccggccgtatctctgtatgccaccgtggatccgcaggactggagcgtgctg
gcgaccgaaacccgggtcgaaatggtgccgattgtcgccaacctgcgccacaacgagctc
gatgagcaagtgacggaagaggcgctggccagtggcacgggtgactacccgcaccggcgc
gaactttcgctgctatggcagtgggcccaggtgctggagcgggcacgcatggccaagcgc
gaaagtttcggtctcaagcccgagcaggcgaaccgcgtcgattttaatttttatgtcgaa
gatgatgtcgtcacgatcgtgcgccgcaagcgcggcgcgccactggacaagatcgtcgcc
gaattgatgatcttcgccaacagcagttggggcaagctcatgcacgagcatggcgtgccc
ggcatttaccgctgccagggcggcggcaatggcggctgggcggcacgcatgcaggtgcgc
atgcagacccacgcggcgccgcaccagggcctgggcgtggaccagtacgcctggagcacc
tcgcccttgcgccggtacaccgacctcgtcaaccagtggcaaatcctcgcctgcatcgag
catggcgtaaccgcgccgttggcggcgcctttcaagccacgggatgccgacttgttcgcg
attgtttcggcattcgatgccgcctatggcgcctatgcggatttccagaccaatatggag
cgctactggtgcctgcgctggcttgagcaaaacgaggcgcgtcgcgtcgacgccgtggtg
ctgaaagaagaagtgctgcgcctggtcgatattcccctgattgtccgcctgcccggcatg
ccggccgcaccgcgaggtagccaggtccggctcgacctgctgcgctgggatgaagtcgag
ttgaccgtggaagcgcgcctgatcgaggtcttgccgatggaggccgatgccgccatcgcc
gaagaagtgctcgacgaagcgatactggatgagccggctgaagccctggtcgaagctgag
gctgaagtcgaggccgatagcgaaatgaccacgaagccgctcgaggcaggcccgggcggc
gatgttaacagtgtcgctgcagcgacagattcggcatcagaagcggacaatcgttaa
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