Janthinobacterium sp. 17J80-10: EKL02_04925
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Entry
EKL02_04925 CDS
T05896
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKL02_04925 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jaj03019
]
EKL02_04925 (recQ)
03400 DNA repair and recombination proteins [BR:
jaj03400
]
EKL02_04925 (recQ)
Enzymes [BR:
jaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKL02_04925 (recQ)
Messenger RNA biogenesis [BR:
jaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EKL02_04925 (recQ)
DNA repair and recombination proteins [BR:
jaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EKL02_04925 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
AroM
Motif
Other DBs
NCBI-ProteinID:
QAU33578
LinkDB
All DBs
Position
1097102..1098925
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AA seq
607 aa
AA seq
DB search
MEESGIRARAQHILDSVFGYPAFRGQQAEIVEQVALGGDALVLMPTGGGKSLCYQIPALL
RDGVGVVVSPLIALMQDQVDALAEVGVRAAYLNSTQSFDEMVQTERKLRRGELDLVYVAP
ERLMTPRCLELLEASKIALFAIDEAHCVSQWGHDFRPEYIKLSVLHERFPAVPRIALTAT
ADQQTREEIIERLQLQEALQFVSSFDRPNIRYQIVEKVNARKQLLDFIESEHAGDAGIVY
CLSRKKVEETAEFLNASGIAALPYHAGMETAKRSANQARFLREDAIVMVATIAFGMGIDK
PDVRFVCHLDLPKSIEGYYQETGRAGRDGAPANAWMAYGLQDVVQQRRMIDQSEADDSFK
RVQGAKLDAMLGLCETLSCRRVRLLEYFGQPASACGNCDTCLNPPVSFDATVPVQKLLSA
IYRTEQRFGAMHVMDVLRGVEADKVKQWQHDQLSVFGIGAERGDAEWRAILRQAIALGLV
TVDHDSFNALKLTDAARPVLRGAQKILLREYQKPVSQRKKGVKPKGYVESDLSTQEQTVF
DKLRWWRVETARKHNVPAYVIFHDATMREIAKARPASLDDLRHVSGVGEKKLETYGEEII
ALMAELA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtccggcatacgcgcacgcgcgcagcacattctcgatagcgtattcggctat
ccggcatttcgcggccagcaagccgagatcgtcgagcaggttgccctcggcggtgatgcc
ctggtcttgatgcccaccggtggcggcaagtcgctgtgctaccagatcccggccttgctg
cgcgacggcgtcggcgtggtggtgtcgccgctgatcgccctgatgcaggaccaggtcgat
gcgctggctgaagtcggcgtgcgcgcggcttacctgaactcgacccagagcttcgatgaa
atggtgcagaccgagcgcaagttgcgccgcggcgagctcgacctggtgtacgtggcgccg
gagcgcctgatgacgccgcgctgcctggaattgctggaagcctcgaagatcgccctgttc
gccatcgacgaggcacattgcgtttcgcaatggggacatgacttccgcccggagtacatc
aagctgtcggtcttgcacgagcgcttccccgccgtgccgcgcattgcgttgaccgccacg
gcggaccagcagacgcgtgaggaaatcatcgagcgcctgcagttgcaggaagcgctgcag
ttcgtttcttccttcgaccgccccaacatccgttatcagatcgtcgaaaaggtcaacgcc
cgcaagcagctgctcgatttcatcgaaagcgaacatgcgggtgacgccggcatcgtgtat
tgcctgtcgcgcaaaaaagtcgaggaaaccgccgaattcctgaatgccagcggcattgcc
gccttgccttaccatgccggcatggagacggccaagcgcagcgccaaccaggcgcgcttc
ctgcgcgaagatgccatcgtgatggtggcgacaattgctttcggcatgggcatcgacaag
cccgatgtgcgctttgtctgccatctcgacctgcccaaaagcatcgagggctattaccag
gaaaccggccgcgccggccgcgatggcgctcccgccaacgcctggatggcgtacggcttg
caggacgtggtgcagcagcgccgcatgatcgaccaatccgaggcagacgacagtttcaag
cgggtgcagggcgccaagctcgatgccatgctgggcctgtgcgaaaccctgtcgtgccgg
cgcgtgcgcctgctggagtatttcggccagcctgccagcgcctgcggcaactgtgacacg
tgcctgaatccgccggtgtccttcgatgccaccgtccccgtgcaaaagctgctgtcggcg
atttaccgcaccgagcagcgcttcggcgccatgcacgtgatggatgtgctgcgcggcgtc
gaggctgacaaggtcaagcaatggcagcatgaccagctctcggtgttcggtatcggcgcc
gagcgtggcgacgccgaatggcgcgccatcctgcgccaggccatcgccctgggcctggtg
acggtggatcacgacagcttcaatgccctgaagctgaccgatgcggcgcggccggtcttg
cgcggcgcgcaaaagatcctgctgcgcgaataccagaaaccggtcagccagcgcaagaag
ggcgtcaagcccaaaggctatgtggaaagcgacctgtcgacgcaggagcagacggtattc
gacaagctgcgctggtggcgcgtcgagaccgcgcgcaagcacaatgtgccagcctatgtc
atttttcacgatgccaccatgcgcgaaatcgccaaggcccggcctgcctcgctggatgac
ttgcgccatgtctcgggcgtcggcgagaaaaagctggaaacctatggcgaggaaatcatc
gcgctgatggccgaactggcctaa
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