Janthinobacterium sp. 17J80-10: EKL02_06930
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Entry
EKL02_06930 CDS
T05896
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EKL02_06930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jaj02000
]
EKL02_06930
Transporters [BR:
jaj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
EKL02_06930
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF3094
Motif
Other DBs
NCBI-ProteinID:
QAU33943
LinkDB
All DBs
Position
complement(1527890..1530994)
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AA seq
1034 aa
AA seq
DB search
MNWSQVFIHRPVATILLTLAIALPGVMAFKHLPVASLPQVDFPTISVSASMPGASPETMA
ATVATPLERALGRIAGITEMTSTSNQGTTRLSLQFDLDRNIDGAARDVQSAINAARSTLP
AGLSGNPTYRKVNSAGPPILAISLTSDTHTQEQLYDIAFTVLGQKISQVQGVGQVNVNGS
ALRSVRVEVNPTVLNQYGIGLDRVRAALAAANVNAPKGFIEDGVQRWQIGLNDQARQARD
YRGLIVSWVNGAPVRLADVATVRDSVQELRNAGTSRGKPAVMLAVMNQPGANVVATVDAV
RALLPRLRDITPAGVEVEVVIDRSTTIRKSLAEVEETLFISIGLVIMVTFLFLRNGRATI
IPAIAIPVSLLGTLAIIYLLGFSLNNLSLMALIISTGFVVDDAIVVVENIIRHIEEGMKP
FDAAIKGAREVGFTVLAMSVSLIAVFIPLLLMGGMIGRLFREFAITMSIAVLISLVISLT
TTPMLSAILLRPAKAGASRLGLWLERLIEIPLRAYRVSLDWSLRHGALILLLLAATIALN
VYLYTIVPKGFFPQQDTGRLNGNFQADQSISFPAMRQKVNQIMKIVAEDPDIDTYYEYTG
GFGAGQTNTGAMFARLKPLSERNATAQEIVARLRPKLAKIAGATLFVNAQQELNIGARPG
SAQFQFTVLADDLQQLKSIAPRLRGALSRLPELTDVNSDYQDKGLQTTLVVDRAAAATFG
ISARQIDATLNNAFGQRLVSTIYEPLNQYYVVLTLQPEYAQGPAALEHIYLMTEKGGKVP
LAAISRWEQTTAPLVVNHQGQFAAATISFNLAQGVALDQAADAIEKAFAELNPPDSVRGR
FAGTAQVFQESLASQPWLILAALLAVYIVLGILYESTIHPLTILSTLPSAGVGALLALIV
CGSEFSIIAFIGVILLVGIVKKNAIMMIDTALQLERDRNLSPEQSIREACLLRFRPILMT
TLAALLGALPLALGAGDGAELRRPLGLSIVGGLLLSQILTLYTTPMVYLKLDRLRHATLQ
SWRRLHAAPAAEPI
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaactggtcgcaagtctttatccatcggccggttgccaccatcctgctgacgctggca
atcgcattgccgggcgtgatggctttcaagcacttgccggtcgcctcgctgccgcaagtg
gattttcccacgatcagcgtcagtgccagcatgccgggcgccagcccggaaaccatggcg
gcgaccgtcgccacgccgctcgagcgggcgttgggacgtatcgccggcatcaccgaaatg
acgtcgaccagcaaccagggcacgacccgcctgagcctgcaattcgacctcgaccgcaac
atcgacggcgccgcgcgcgacgtgcaatccgccatcaatgctgcccgttcgacgttgccc
gcaggcctgtccggcaacccgacctaccgcaaggtcaattccgccggcccgcccatcctg
gcgatttccctgacctcggacacgcatacgcaggaacagctctacgacatcgctttcacc
gtgctcggccagaagatttcgcaggtacagggcgtcggccaggtgaatgtcaacggcagc
gcgctgcgctcagtgcgcgtggaagtcaacccgaccgtgctgaaccagtatggcatcggg
ctggacagggtgcgcgccgcgctggcagcggccaatgtcaatgcgcccaaaggcttcatc
gaggatggcgtgcagcgctggcaaatcggcctcaacgaccaggccaggcaggcacgcgac
tatcgcggcctgatcgtcagctgggtcaatggcgcgccggtgcggctggccgatgtcgca
acggtgcgcgactccgtgcaggaactgcgcaatgccggcacttcgcgcggcaagcccgcg
gtcatgctggccgtaatgaaccagcccggcgccaacgtggttgccaccgtcgatgcggtc
agggcgctgttgccgcgcctgcgggatatcacgccggccggggtcgaggtcgaggtggtg
atcgaccgcagcaccaccatccgcaagtcgctggccgaagtcgaggaaacgctgttcatt
tccatcgggctggtgatcatggtcaccttcctgttcctgcgcaacggccgtgccaccatc
attcccgccatcgcgatcccggtgtcgctgctgggcacgctggcgatcatttatctgctc
ggcttcagcctcaacaatctctcgctcatggccttgatcatttccaccggtttcgtggtg
gacgacgccatcgtggtcgttgaaaacatcatccggcacatcgaggaaggcatgaagccg
ttcgacgccgccatcaagggcgcgcgcgaagtcggctttaccgtgctggcgatgagcgtg
tcgctgatcgcggtattcattccgttgttgctgatgggcggcatgatcggccgcctgttc
cgcgaattcgccatcacgatgtcgatcgccgtgctgatttcgctggtcatctcgctcacc
accacgccgatgctgagcgccatcctgctgcgtcccgccaaggccggcgccagccgccta
ggcctgtggctcgagcgcctgatcgagatacccttgcgggcctatcgcgtcagcctggac
tggtcgctgcgccatggcgcattgatcctgctgttgctggcagcgaccattgcactgaat
gtctacctttacacgatcgtgccgaaaggctttttcccgcaacaggataccgggcggctg
aacggcaatttccaggccgaccaaagcatctcgttcccggcgatgcgacaaaaagtcaac
cagatcatgaagatcgtcgccgaagatccggatatcgacacttactacgagtacaccggc
ggcttcggcgccggccagacgaataccggcgccatgtttgcccgtctgaagccattatca
gaaaggaatgcgaccgcgcaggaaatcgttgcgcggctgcgccccaaactggcaaagatt
gccggagccaccctgtttgtcaatgcccagcaagagttgaacatcggcgcccgcccgggc
agcgcgcaattccagtttaccgtcctggccgacgacctgcagcaactgaaaagcatcgcg
ccccggctgcgcggtgcactgtcacgcctgcccgagcttaccgacgtcaacagcgattac
caggacaagggattgcaaacgacgctggtggtggaccgcgccgccgctgccacgttcggc
atcagtgcacggcagatcgacgccacgctcaacaatgcctttggccagcgcctggtatcc
accatttacgagccgctcaaccagtactatgtcgtactgacgctgcagccggaatatgcc
cagggccccgccgcgctggagcatatctacctgatgacggaaaaaggcggcaaggtgccg
ctggcggcgatcagccggtgggaacagaccacggcgccgctggtggtcaaccaccagggc
cagtttgccgccgccaccatttccttcaacctggcacaaggcgtggcgcttgaccaggcc
gccgatgccattgaaaaagcctttgccgagctcaacccacccgattccgtcaggggacgc
tttgccggcaccgcgcaagtattccaggagtcgcttgccagccagccctggctgattctt
gccgcattgcttgcggtttatatcgtgctcggcatcctttacgaaagcacgattcatccg
ctgaccatcctgtcgaccttgccgtctgccggtgtgggcgccctgcttgcgctgattgtc
tgcggcagcgaattttcgatcatcgcctttatcggcgtgatcctgctggtcggcatagtc
aagaaaaacgccatcatgatgatcgataccgcgctgcagctcgaacgcgaccgcaacctg
agcccggaacagtcgatccgagaagcctgcctgctgcgcttccgccctatcctcatgacc
acgcttgcagcactgctgggcgccctgccgctggccctgggcgccggcgacggcgccgag
ctgcggcgaccgctcgggctgtcgatcgtcggcggcctgctgctgtcgcagatactcacg
ctgtacaccacgccgatggtttacctgaaactggaccggctgcgacacgcaaccctgcaa
agctggcgccgcctgcatgccgcaccggcagccgagccgatttga
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