KEGG   Janthinobacterium sp. 17J80-10: EKL02_09585
Entry
EKL02_09585       CDS       T05896                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
jaj  Janthinobacterium sp. 17J80-10
Brite
KEGG Orthology (KO) [BR:jaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jaj03032]
    EKL02_09585
   03036 Chromosome and associated proteins [BR:jaj03036]
    EKL02_09585
   03400 DNA repair and recombination proteins [BR:jaj03400]
    EKL02_09585
DNA replication proteins [BR:jaj03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EKL02_09585
Chromosome and associated proteins [BR:jaj03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EKL02_09585
DNA repair and recombination proteins [BR:jaj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EKL02_09585
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 TBPIP HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: QAU34411
UniProt: A0A410USS5
LinkDB
Position
2093042..2093314
AA seq 90 aa
MNKSELIDHIAESADLSKADAGRALDALVDAVKITLKKNGTVTLVGFGTFSVGKRAARTG
RNPQTGAAIKIKAAKVPKFKPGKGLKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataaatccgaattaatcgatcacattgccgaatctgccgatctgtccaaggccgat
gcaggtcgtgcgctggatgcgctggtcgatgcagtcaagatcacgttgaaaaagaacggt
actgtgaccctggtgggctttggtactttctcggtaggcaagcgcgctgcgcgcaccggc
cgcaatccgcaaactggcgcggcgatcaagatcaaggcagccaaggtgccgaagtttaag
ccgggcaaaggcctgaaagacgccgtcaactaa

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