Janthinobacterium sp. 17J80-10: EKL02_11475
Help
Entry
EKL02_11475 CDS
T05896
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj03030
DNA replication
jaj03430
Mismatch repair
jaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKL02_11475
03430 Mismatch repair
EKL02_11475
03440 Homologous recombination
EKL02_11475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jaj03032
]
EKL02_11475
03400 DNA repair and recombination proteins [BR:
jaj03400
]
EKL02_11475
Enzymes [BR:
jaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKL02_11475
DNA replication proteins [BR:
jaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKL02_11475
DNA repair and recombination proteins [BR:
jaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKL02_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
PAS_9
PAS
DEDDh_C
PAS_4
DNA_pol_A_exo1
PAS_8
DUF6474
Rota_NS6
Motif
Other DBs
NCBI-ProteinID:
QAU34757
LinkDB
All DBs
Position
complement(2557686..2559878)
Genome browser
AA seq
730 aa
AA seq
DB search
MLARLFARHRFALSLTLLSALQIAVAGALLLIFTRVPDSGQRNALLAALAFFLLLALGLG
LRFVFRAYIFPLARLGEEIVLLKNNPAHRVMPQGGAAVRTLGATLNDLGATCQALQEDSE
ARIALAGRELAQERTRLAALMAELSVGVLVCNIEGRILLYNRHARQLLMRGKGAGEAPDS
APLGLGRSLFGLVERGLVVHALEQIQHRLHQQHDTEEPDAHNAAKAEVSSRFIAPLASGF
LVRARMAPVLDESGKLGGFVLVLEDITREVEADSRRDALLQAFNRDARSALANLRAAVET
VQAFPEMDGARRERFISVIEEESQRLARGVERALNEYGSEFEGRREFEEMRAEDLLGLLV
RRLDSPALRVQPATAASGNGGNPAADADAGLWLAVDSYALSQALAHWCRQMADATQVREI
FLGVRRDGGLARFEFGWMGAEPGAALLQSWEQASPAGDAGGEAMSIGAVLARHAGESVYR
YDAGSASSRYCLLLPASAAPAPLAIAFRGEGRPVFYDFDLFQQAGQDAALDSLPLAQISY
TVFDTETTGLYPAAGDEIISIGAVRIVNGRLLQQENFDRMIRPRCPVSAESVAIHGITED
MLAGHPRVEQVLPQFQRFVEDTVLVAHNAAFDLRFLQMQEAQTGVRFGQQVLDTLLLSQV
IHPHQLEHTLEAIAARLGVTVVGRHTALGDAIVTAEVFLRMLPLLADKGIRTFGEARDAE
RQTRYARLRY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgcgcctttttgcccgccaccgctttgccttgtcgctcacactgctgtctgcg
ctgcagatcgcagttgccggcgcattactgctgattttcacgcgggtgccggacagcggg
caacgcaatgcgctgctggcggccctggcgttttttttgctgctggcacttggccttggc
ctgcgcttcgtgtttcgcgcctatatttttcctctggcaaggctgggggaagagatcgtt
ttattgaaaaataatccagcccatcgtgtcatgccgcagggcggtgcggcggtgcgaacg
ctgggcgcaacgctcaacgatcttggcgccacctgccaggccctgcaggaagacagcgag
gcaaggattgcccttgccggacgcgagcttgcccaggaaaggacgcgccttgccgcgctg
atggcggagctgtcggtgggtgtgctggtatgtaatatcgaggggaggatcctgctctac
aaccgacacgcgcggcaattactcatgcgcgggaagggcgcaggcgaggcgccggattcg
gcgcccctgggcctcgggcgctcgctgttcggacttgtcgagcgcggcctggtggtgcat
gcgcttgagcagatccagcatcggctgcatcaacagcacgataccgaagagcccgatgcg
cacaatgcggcaaaggccgaggtgtcatcgcgcttcatcgcgccgctggccagcggtttt
ctggtacgcgcgagaatggccccggtgctcgacgaatccggcaagctgggcggtttcgtg
ctggtgctggaagacattacacgcgaggtggaagccgacagccggcgcgatgcattgctg
caggcatttaaccgcgatgcgcgctcggcactggctaatttgcgggcggcggtggaaacg
gtgcaggcctttccggaaatggatggcgcgcgtcgcgaacggttcatcagcgtcatcgaa
gaggagtcgcaacgcctggcgcgcggtgtcgaacgtgcgctcaacgagtacggaagcgaa
ttcgaggggcgccgcgagttcgaggaaatgcgcgccgaagatcttctcggcttgctcgtt
cgccggctcgattcgcctgcgctgcgcgttcagccggcaacggcggcaagcggcaacggc
ggcaatccggcagcggatgccgatgccggactctggcttgcggtcgacagctacgccctg
agccaggcgctggcgcactggtgccggcagatggccgatgcgacgcaggttcgcgagatt
ttcctgggcgtgcggcgggatggcgggctggcgcgatttgaattcggctggatgggggcg
gagcccggtgcggcgctgctgcagtcctgggagcaggcgtcgccggccggcgatgccggg
ggcgaagcaatgagtatcggcgcggtcctggcgcgtcacgccggcgagtcggtgtaccgc
tatgacgcaggtagcgcaagctcgcgctattgcctgttgctgccggcaagcgctgcgccg
gcgccgctggcaattgcgttccggggagagggcaggccggtattttacgatttcgacttg
ttccagcaagccggacaggatgccgcgctcgacagcttgccacttgcgcaaatcagctac
accgtattcgatacggagacgaccggtctttaccctgccgccggggatgaaatcatttcc
atcggcgctgttcgcatcgtcaacgggcgcctgctgcagcaggagaatttcgatcgcatg
atacgaccgcgctgcccggtgtcggcggagtctgtcgccattcatggcatcaccgaagac
atgcttgcaggccatccgcgggtcgagcaggtgctgccgcaattccagcgttttgtcgaa
gatactgtgctggtggcgcacaatgcggcgttcgacctgcgcttcctgcaaatgcaggaa
gcgcagaccggcgtgcgcttcgggcagcaggtgctcgacaccttgctgctctcgcaggtg
atccatccgcatcagctcgagcataccctggaagccatcgctgcccgcctgggtgtgacg
gtcgtcggccgccacacggcgctgggcgatgcgattgtcactgcggaagtgtttctgcgc
atgctgccgctgctggccgataaaggcatccgtacgttcggtgaggcgcgcgatgccgag
cggcagaccagatatgcgcgcctgcgctattga
DBGET
integrated database retrieval system
