KEGG   Janthinobacterium sp. 17J80-10: EKL02_13555
Entry
EKL02_13555       CDS       T05896                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
jaj  Janthinobacterium sp. 17J80-10
Brite
KEGG Orthology (KO) [BR:jaj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:jaj02048]
    EKL02_13555 (cas8c)
Prokaryotic defense system [BR:jaj02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    EKL02_13555 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: QAU35120
LinkDB
Position
complement(3018172..3019920)
AA seq 582 aa
MILQALSDYYLRCQRSPDPQDRLPAFGLEEKEIPFVIEIDAEGRLVNLADTRTLEVKKKI
GQRFLVPQGAKKTSGVVANLLWDTAEYVLGVDTKGKPERVAEQHAAFRTRLAGLPPDALN
DAGIQAILAFFSGFDLIQFEAFTVWPEILLTNPVMTFRLHGDMELVCQRPLIVAATAVTT
DGVTPDGVCLVSGSAATIERLHPAIKGVWGAQTSGANIVSFNLDAFNSYGKVQGANAPLG
KPAVFAYTTALNHLLARDSRQRIQVGDASTVFWAKEVHDLEAVLPDLFGEPPKDDPDRGT
DALKVLYQSVQSGKFSHGAADTRFHVLGLSPNAARIAIRFWETAPANELAQRIARHFDDI
KIARAPHDPEHLSLFRLLTSLAVQGKADNIPPNLGGEVMRAILQGLPYPAPLLNLAVQRT
RAEQKPTYARAAAIKASLNRIIRRANLTAFASEKEFQAMLDQTNANPAYLLGRLFATLEK
IQEEASPGLNATIRDRYYSAASSTPVAVFTTLLRLKNHHLGKLPKGRAVQMERLIGEIMG
GLDGFPRILALPDQGRFALGYYHQRQSFFTKAESTNNQEESK
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgattctgcaagcgcttagcgactactacttgcgctgtcaacgttcacccgatccccaa
gatcggctgccggcttttggcctcgaagaaaaagaaatcccatttgtcatcgaaattgat
gcggaagggcggctcgtcaatctggccgatacgcgcacattagaagtaaagaaaaaaatt
ggtcagcgttttctggtgccgcagggcgcgaaaaaaacctccggagttgtcgccaacctt
ctttgggatacggccgaatatgtacttggggtggataccaaaggcaagccggagcgcgtt
gctgaacagcacgcggcatttcgcacacgactggcaggcttgccgccggacgcgttaaac
gatgccgggatacaagcgattcttgcgtttttcagcggcttcgatctcatacaattcgag
gcctttactgtgtggccagagattcttctcaccaatccagtcatgacatttcgactgcat
ggcgatatggagctggtttgccagcgtcccctgattgttgcagcaaccgctgtgacgacg
gatggcgttacgcctgatggtgtctgcctcgttagtggcagcgctgctacgattgaacgt
ttgcacccagccatcaagggtgtatggggtgcacaaacatccggcgcgaacattgtttct
ttcaacctagatgcgttcaactcctacggcaaggtacaaggtgcgaatgcccctctcggg
aaacccgccgtttttgcctacaccacggccctcaatcacttgctggcgcgcgactcccgc
caacgcatccaggtcggcgatgcctccaccgttttctgggcgaaagaagtacatgacctg
gaggctgtattgcctgatttgtttggcgagccgcccaaagacgatcctgaccggggaacg
gatgctttgaaggtgctgtatcagtcagtccagtccggaaaattttcccacggcgccgca
gatacccgcttccatgtcctggggctgtcgcccaacgctgcgcggatcgctatccggttt
tgggaaactgcgcctgctaatgaactcgctcagcggatcgcccgtcatttcgacgatatc
aagatagcgcgggcaccgcacgacccggaacatctgtcactttttaggctgttgacgtcg
ctcgcggtgcaaggcaaagccgacaacatcccgcccaacttgggtggcgaagttatgcgt
gccattttgcaaggcttaccttatccagcaccattgcttaacttggctgtacaacgcacc
cgggcggaacaaaaacctacctatgcgcgcgctgccgccatcaaagcttcattgaatcga
atcattcgtcgtgccaaccttaccgcattcgcatccgagaaggaatttcaagctatgctc
gaccagacaaacgccaatccagcttatcttttggggcgattatttgcgaccctggaaaaa
attcaagaagaggctagccccggcctcaacgcaaccatacgcgaccgttattacagtgct
gcgtccagcacgccggtcgccgtcttcacaacgctactgcgattaaaaaatcatcacctt
ggcaaacttccgaaaggacgcgccgtgcagatggaaagactgattggcgaaatcatgggc
gggcttgatggctttccccgcattctcgctttaccagatcaaggccgatttgccctcggt
tactaccaccaacgccaatcttttttcactaaagcagaatccaccaacaaccaagaggaa
tccaaatga

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