Janthinobacterium sp. 17J80-10: EKL02_15885
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Entry
EKL02_15885 CDS
T05896
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj03030
DNA replication
jaj03430
Mismatch repair
jaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKL02_15885
03430 Mismatch repair
EKL02_15885
03440 Homologous recombination
EKL02_15885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jaj03032
]
EKL02_15885
03400 DNA repair and recombination proteins [BR:
jaj03400
]
EKL02_15885
Enzymes [BR:
jaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKL02_15885
DNA replication proteins [BR:
jaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKL02_15885
DNA repair and recombination proteins [BR:
jaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKL02_15885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RMI1_C
Motif
Other DBs
NCBI-ProteinID:
QAU35523
UniProt:
A0A410UW04
LinkDB
All DBs
Position
3532843..3536289
Genome browser
AA seq
1148 aa
AA seq
DB search
MTSPQFIHLRLHSEYSIADGLVRIDDVVKAAAKDQQPALAITDLANLFGMVKFYKAARGK
GVKPIAGCDVWITNDDDREKPSRLLLLVKNRDGYLQLCELLSQAWLTNLHRGRAEIRAEW
LAQLPPGGLIALSGAQYGDIGMAIDNGNLAAAEKSAQRWATIFAGHFYIEVQRPGLGNTE
APLRQAVALAARLGLPVVATHPVQFLSPEEFTAHEARTCIAEGEILANTRRVRRFSEQQY
FKTQDEMVALFADMPAALQNTLEIAKRCNLELELGKPKLPNFPTPGMTIDEFLVAQSKAG
LEERLLQLFPDETRREQVRQRYEDRLKFETDTIIKMGFPGYFLIVADFIQWGKNNGVPVG
PGRGSGAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQENRDRVIQYVK
DRYGREAVSQIATFGTMAAKGAVRDVGRVLDMSYMFCDGISKLIPFKPGKQVTIADAIEE
EPLLKERMNNEEEVKQLLDLAQQVEGIARNIGMHAGGVLIAPGKLTDFCPLYTQGGDAGV
VSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVNYIKMLDPAKADFALEKLPLNDRPSYEL
LTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCRRKHGEKFD
YPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAEHREIF
RTGAAKNGLTQEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAFMAANM
SLAMDDTDKVKILVEDAMDVCGLTILPPDINQSDYRFMPVGEPGKKAMQIRYGLGAVKGS
GQGAIEAIVAARKSGGPFTDLFDFTKRVDKQQINRRTIESLIRAGAFDCFQVDRAILLAS
VALALEGAEQAQAAANQVSLFGDDSDMAAPPEYIKVPAWSEKQRLTEEKAALGFYLSGHL
FNAYAPEVRKFARSKLADLAPSRDPRLIAGVITTVRTQMTQRGKLVIVTLDDGSATVDVT
VYNEMFEPNRRMFKEDEFLAVQGKVSEDRFSGGLRITAEKVMDIAAARAAFGKALRLSMN
GQADANKLREMLAPYQQAEDACRIIVEYTKNGALGELQLSDAWRVRGDDALRSQLGEWLK
HENVWFEY
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccgcaatttatccatctccgcctccactccgaatactccatcgccgatggc
ctggtgcgcatcgacgacgtcgtcaaggcagccgccaaggaccagcaaccggcgctcgcc
atcaccgaccttgccaacctgttcggcatggtcaagttctacaaggcggcacgcggcaag
ggcgtcaagccgatcgccggctgcgacgtctggatcaccaacgacgacgaccgcgaaaaa
ccctcgcgcctgcttttgctggtcaagaaccgcgatggctacctgcagctgtgcgaattg
ctgagccaggcctggctgaccaacctgcaccgcggacgcgctgaaatccgcgccgaatgg
ctggcgcaattgcccccgggcggcctgattgccttgtcgggcgcgcaatacggcgatatc
ggcatggccatcgacaatggcaacctggcggccgcggaaaaatccgcgcagcgctgggca
acgatctttgccgggcatttttacatcgaagtgcagcggcctggtctcggcaataccgag
gcgcccctgcgccaggcggtggcgctggccgcccgcctcggcctgccggtggtggcaacc
caccctgtgcaattcctgagcccggaagaattcaccgcgcacgaagcgcgcacctgtatc
gccgagggcgagatcctcgccaatacgcgccgcgtcaggcgtttttccgaacaacagtac
ttcaagacgcaggacgaaatggtggcgctgtttgccgacatgcctgcggcgctgcagaac
accctggaaatcgccaagcgctgcaacctcgagctggaactgggcaagcccaagctgccg
aatttccccacccccggcatgaccatcgacgagttcctggtggcgcagtcgaaggcgggc
ctggaggaacgcctgctgcagttattcccggatgaaaccaggcgcgagcaggtgcgccag
cgctatgaggatcgcctgaagttcgagaccgacaccatcatcaagatgggctttcccggc
tacttcctcatcgtggcggactttatccagtggggcaagaacaatggcgtgccggtgggg
ccggggcgcggctccggcgccggctcgctggtggcgtatgcgctcaagatcacggatctc
gacccgctccagtacaacctgctgttcgagcgcttcctgaacccggaacgcgtctcgatg
cccgacttcgacatcgacttttgccaggaaaaccgcgaccgcgtgatccagtacgtcaag
gaccgctacggccgcgaggccgtgtcgcagatcgccaccttcggcaccatggccgccaag
ggcgcggtgcgcgatgtcggccgcgtgctcgacatgagctacatgttttgcgacggcatc
tccaagctgattccgttcaagccgggcaagcaggtcaccattgccgacgccatcgaggaa
gagccgctcctgaaggagcgcatgaacaacgaggaagaggtcaagcagttgctcgacctc
gcccagcaagttgaaggcattgcccgcaacatcggcatgcacgccggcggcgtgctgatc
gcccccggcaagctgaccgatttttgcccgctttacacccagggcggcgacgccggcgtg
gtgtcgcagtacgacaaggatgacgtcgaggccgtcggcctggtcaagttcgactttctg
ggcctgaccacgctgaccatcctggatcgcgcggtgaactacatcaagatgctcgacccg
gccaaggccgatttcgcgctggagaagctgccgctgaacgaccggccctcctatgagctg
ctgaccaaggcaaaaaccgtcgccgtgttccagcttgaaagccgcggcatgcagggcatg
ctgaaggatgcgcggcccgaccgcttcgaggacatcattgcgctggtggcgctgtaccgt
ccgggcccgatggacctgatcccggatttttgccgacgcaagcatggcgagaaattcgac
tatcctgatccgcgcaccgagggcatcctgtccgaaacctacggcatcatggtgtaccag
gagcaggtgatgcagatggcacaggtgatcggcggctactcgctgggcggcgccgatctc
ttgcgtcgcgccatgggcaagaagaaggccgaggaaatggccgagcatcgcgaaattttc
cgcaccggcgccgccaagaacggcctgacgcaggaaaaggccgacgagattttcgacttg
atggaaaagttcgccggctacggcttcaacaagtcgcacgccgccgcctacgcgctgctg
tcctatcacaccgcctacctcaaggcgcatcatccggccgcgttcatggcagccaacatg
tcgttggccatggacgacaccgacaaggtcaagatcctggtcgaggatgccatggatgtc
tgcggcctgacgatcctgccgccggacatcaaccagtcggactaccgcttcatgccggtg
ggcgagccgggcaagaaagccatgcagatccgctatggcctgggcgcggtcaagggctcg
ggccagggcgccatcgaggcgatcgtcgctgcgcgcaagtctggcgggccgtttaccgac
ctgttcgactttaccaagcgggtggacaagcagcagatcaaccgccgcaccatcgaatcg
ctgatccgcgccggcgccttcgactgcttccaggtcgaccgcgcgatcctgctggcatcg
gttgccctggcgctggaaggcgccgagcaggcccaggcggctgccaaccaggtcagcttg
ttcggcgacgacagcgacatggctgcgccccccgaatacatcaaggtgcctgcctggagc
gagaagcagcgcctgaccgaggaaaaggccgcgcttggcttctacctgtccggccacctg
ttcaatgcctatgctcccgaagtgcgcaagttcgcgcgcagcaagctggccgacctcgcg
ccctcgcgcgatccgcgcctgatcgccggcgtcatcaccacggtgcgcacgcaaatgacc
cagcgcggcaagctggtcatcgtcacgctcgacgacggcagcgcaacagtcgatgtcacg
gtctacaacgagatgttcgagccgaaccggcgcatgttcaaggaagacgaattcctggcc
gtgcagggcaaggtctcggaagaccgcttctccggcggcttgcgcatcacggccgagaaa
gtcatggatatcgccgctgcgcgcgccgccttcggcaaggccttgcggctgtcgatgaat
ggccaggccgacgccaataagctgcgcgagatgctggcgccttaccagcaggcggaagat
gcctgccgcatcatcgtggagtacaccaaaaatggcgcgctgggcgagttacagctgtcc
gacgcctggcgcgtgcgcggcgacgatgccctgcgcagccagctgggcgaatggctcaag
cacgagaatgtctggttcgagtattga
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