Janthinobacterium sp. 17J80-10: EKL02_16105
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Entry
EKL02_16105 CDS
T05896
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj00521
Streptomycin biosynthesis
jaj00523
Polyketide sugar unit biosynthesis
jaj00525
Acarbose and validamycin biosynthesis
jaj00541
Biosynthesis of various nucleotide sugars
jaj01100
Metabolic pathways
jaj01110
Biosynthesis of secondary metabolites
jaj01250
Biosynthesis of nucleotide sugars
Module
jaj_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EKL02_16105 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EKL02_16105 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EKL02_16105 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EKL02_16105 (rfbB)
00525 Acarbose and validamycin biosynthesis
EKL02_16105 (rfbB)
Enzymes [BR:
jaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EKL02_16105 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
QAU35564
UniProt:
A0A410UW20
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Position
3621486..3622553
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AA seq
355 aa
AA seq
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MILVTGGAGFIGSNFVLDWLAQSNEPVINLDKLTYAGNVHNLASLAGDARHVFVQGDIGD
SALVKSLLDQYQPRAILNFAAESHVDRSIHGPEDFIQTNIVGTFRLLEEVRTYWRRLEAA
GQASFRFLHVSTDEVYGSLKKDDPAFTEHHAYAPNSPYSASKASSDHLVRAYHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKALPIYGDGKQVRDWLYVKDHCSAIHRVLES
GQPGETYNIGGWNEMPNIDIVHAVCHLLDALHPRGDGKPYADQITYVADRPGHDRRYAID
ASKIERELGWKPAETFESGIRKTVQWYLDNPAWVANVQSGAYRDWLATNYAGRTA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgattttagtgaccggcggagcgggtttcattggttccaattttgtcctggactggctc
gcgcaatccaatgaacctgtcatcaacctggataagctgacctacgcaggcaacgtgcac
aacctggccagcctggcaggcgatgcccgccacgtattcgtccagggcgatattggcgac
agcgcactggtcaaatccctgctagaccagtatcagccgcgtgccatcctcaatttcgcc
gcagaaagccatgtcgatcgatccatccatggtccggaagattttatccagaccaatatc
gtcggcacgtttagattgcttgaagaagtgcgcacttactggaggcgcctggaggcagcg
gggcaagccagtttccgcttcctgcatgtctccaccgatgaagtctatggctcgctgaaa
aaagacgaccctgcctttaccgagcatcatgcgtatgcgcccaacagcccctattcagcc
agcaaggcgtccagcgaccacctggtgcgtgcctaccatcacacgtacggcttgccggta
ctgacgaccaattgctcgaacaattatgggccctaccatttcccggaaaagctgatcccg
ctcatgatcgtcaatgcactggccggcaaggcgctgccgatctatggcgacggcaagcag
gtgcgcgactggctatatgtgaaagaccactgtagcgccattcaccgtgtgctggaaagc
gggcaaccgggcgaaacgtacaatatcggcggctggaatgaaatgccaaacatcgatatc
gtgcatgccgtttgccacttgcttgatgccctgcacccgcgcggggatggcaagccttac
gccgatcaaatcacctacgttgccgaccgtcctggacacgaccgccgctatgccatcgat
gccagcaagatcgagcgcgaactgggctggaagccggcggaaacttttgaaagcgggata
cgcaaaaccgtacagtggtatctggataacccggcatgggtggccaatgtacaaagcggc
gcttaccgcgactggctcgcaaccaattatgcgggccgcacggcatga
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