Janthinobacterium sp. 17J80-10: EKL02_17080
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Entry
EKL02_17080 CDS
T05896
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj03420
Nucleotide excision repair
jaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EKL02_17080
03430 Mismatch repair
EKL02_17080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jaj03400
]
EKL02_17080
Enzymes [BR:
jaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKL02_17080
DNA repair and recombination proteins [BR:
jaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EKL02_17080
MMR (mismatch excision repair)
Other MMR factors
EKL02_17080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
DUF6525
Motif
Other DBs
NCBI-ProteinID:
QAU35739
UniProt:
A0A410UWJ6
LinkDB
All DBs
Position
complement(3830536..3832821)
Genome browser
AA seq
761 aa
AA seq
DB search
MQNLLHNLNPEQLAAVTLPAQSAMILAGAGSGKTRVLTTRIAWLIQTGQVAPNGILAVTF
TNKAAKEMQARLSAMLPINTRGMWIGTFHGLCNRLLRAHYRDAALPQTFQILDSQDQLSA
IKRLLKANNIDDEKYPPRNLMYFINSAKDQGLRAHEVDAYDDFNRKLVQLYELYDQQCQR
EGVVDFAELLLRTYELLSRNQPLREHYQARFSHILVDEFQDTNDLQYKWLKLLAGKHGAV
FAVGDDDQSIYAFRGANVGNMMAFERDFQVQNLIKLEQNYRSHGHILDCANTLIANNSKR
LGKNLRTDAGHGEQLRVQEASSDLQEAQWIIEEAKSLIAEGAARSEIAVLYRSNAQSRVI
EHALFSANIPYRVYGGQRFFERAEVKHAIAYLQLMDNPHNDSAFLRVVNFPTRGIGARSI
EQLQDAARQYNISLYAAVPYVSGKAGTSLGAFVKLIEGARFETQNLPLQEMVQVVLDMSG
LLQHYQNEKEGADRIENLEQLVSAAMLFVSEEGFGIDTPAQAGPKAQAVAGAAITTAGGV
EIIDADAALSTIMSPLSAFLSHASLEAGDNQAQAGQDALQLMTVHSAKGLEFDAVFITGL
EEGLFPHENSQQEQGGLEEERRLMYVAITRAKKRLYLSFSQTRMLHGQTRYNMKSRFFDE
LPDACLKWLSPRVQQHHWSAHTNRAAWVDAPQAGANAIAQKIGNRDIGWKIGETVSHHRF
GEGVIVNIEGGGSPRAHINFGRHGMKLLDLGVAKLEKVARA
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcttctccacaacctcaatcccgagcaactcgccgccgttaccctgccagcc
caatcggcaatgatcctggcgggggccggttccggcaagacgcgcgtgctgacgacccgc
atcgcctggctgatccagaccggccaagtggcgccgaatggcatcctggcggtgacattt
accaacaaggccgccaaggaaatgcaggcgcgcctgtcggccatgttgccgatcaataca
cgcggcatgtggatcggcacattccacggcttgtgcaaccgcctgctgcgcgcgcattac
cgcgatgctgccttgccgcagaccttccagattctcgattcgcaagaccagttgtcggcc
atcaagcgtttgctcaaggcaaacaatatcgatgatgagaaatatccgccgcgcaatctg
atgtatttcatcaatagcgccaaggaccagggcttgcgtgcgcacgaagtcgatgcctat
gacgatttcaaccgcaagttggtgcagttgtatgaactgtatgaccagcagtgccagcgc
gaaggggtcgtggattttgccgaactgctgttgcgcacctatgaattgctttcccgtaac
cagccgttgcgcgagcattaccaggcccgcttttcgcatatcctggtcgatgaattccag
gataccaacgacctgcaatacaagtggctgaagctgttggccggcaagcatggcgcggtg
tttgcggtgggcgacgatgaccagagcatctacgccttccgcggcgccaatgtcggcaac
atgatggcgttcgagcgcgacttccaggtgcaaaacctgatcaagctggaacagaattac
cgctcgcacgggcatatcctggattgcgccaataccctgattgccaataacagcaagcgg
ctaggcaagaacctgcgcaccgacgccggccatggcgagcaattgcgagtgcaggaagcg
tccagcgacttgcaggaagcgcaatggatcatcgaggaagccaagagcctgatcgccgag
ggcgccgcgcgcagcgaaatcgccgtgctgtaccgctccaacgcgcagtcgcgcgtgatc
gagcatgcgctgttttccgccaacattccctatcgcgtgtatggcggccagcgctttttc
gaacgcgccgaagtcaagcatgccatcgcctacctgcagctgatggataacccgcacaac
gactcggccttcctgcgcgtggtgaattttcccacgcgcggcattggcgcgcgttccatc
gagcaattgcaggatgcggcgcgccagtacaacatttcgctgtacgcggcagtgccctat
gtttccggcaaggccggcacctcgctgggcgcgttcgtcaagcttatcgagggcgcgcgc
ttcgagacgcaaaacctgccgctgcaggaaatggtgcaggtggtgctcgacatgagcggc
ttgctgcagcattaccagaacgagaaggaaggcgccgaccgcatcgaaaacctcgagcag
ctggtcagcgccgccatgctgttcgtgtccgaggaaggcttcggcatcgacacgcctgcg
caggccggtcccaaggcccaggccgtcgcgggcgcggccatcaccacggccgggggcgtg
gaaatcatcgatgccgacgcagccctgtcgaccatcatgtcgccgctgtcggcattcctg
tcacatgcgtcgctcgaagccggcgacaaccaggcgcaggccggccaggatgccttgcag
ctcatgacggtgcattcggccaaggggctggaattcgatgcggtgttcatcaccgggctg
gaagagggcttgttcccgcacgagaattcgcagcaggagcagggcgggctggaagaggag
cggcggctgatgtatgtggcgattacgcgcgccaaaaaacgcctgtacctgagcttttcg
caaacccgcatgctgcatggccagacccgctacaacatgaagtcgcgctttttcgacgag
ttgccggacgcctgcctgaagtggctgtcgccgcgcgtgcagcagcatcactggtctgcg
catacgaacagggcggcttgggtcgatgcgccgcaggccggcgccaatgccatcgcgcag
aagatcggcaacagggatatcggctggaagatcggcgagacggtgtcgcaccaccggttc
ggcgagggcgtgatcgtcaatatcgagggcggcggcagcccgcgcgcgcacatcaatttc
ggccgccacggcatgaagctgctggacctgggcgtggcgaagctggagaaagtcgcgcgc
gcctga
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integrated database retrieval system
