Janthinobacterium sp. 17J80-10: EKL02_17790
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Entry
EKL02_17790 CDS
T05896
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Pathway
jaj00300
Lysine biosynthesis
jaj00470
D-Amino acid metabolism
jaj01100
Metabolic pathways
jaj01110
Biosynthesis of secondary metabolites
jaj01120
Microbial metabolism in diverse environments
jaj01230
Biosynthesis of amino acids
Module
jaj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EKL02_17790 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EKL02_17790 (lysA)
Enzymes [BR:
jaj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EKL02_17790 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QAU35862
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All DBs
Position
3972214..3973497
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AA seq
427 aa
AA seq
DB search
MSHFTYRNGVLCAENLPLTEIAERFGTPTYVYSKAALLENYAAYADACKKHGRDEKTALV
CYSVKSNSNLAVLNLLARQGSGFDIVSGGELLRVLAAGGDPRKVIFSGVGKSREEMRLAL
SHDILCFNVESLAELHRLNDVAGQEGKQAPVSLRVNPNVDPKTHPYISTGLKENKFGVAF
EEALDIYRTAAGLPHIRVTGIDCHIGSQLLDDAPLLEALDKLIELIDTLSAEGIAIHHLD
IGGGIGIVYDQDQPVAVGDYLGRLFARIDAWRAARHGNAPITVLFEPGRSIVGNAGVLIT
EVQYLKHGGAKNFAIVDAAMNDLMRPAMYEAWHGVQAVRQREGSASTYDVVGPVCESGDW
LARARALNIAQGDLLAILSAGAYGMTMSSNYNTRGRAAEVIVDGAEMHLVRPRELPEQLF
AQEKLLA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcattttacttatcgtaacggcgtgctttgcgccgaaaatctgcctctgactgaa
attgccgagcgtttcggcacgcccacttatgtttattccaaggcggcgttactggaaaat
tatgccgcttatgccgacgcctgcaaaaaacatggccgcgatgaaaagacagccctggtc
tgctattcggtcaaatccaattccaatctggccgtgctgaacttgctggcacgccagggg
tccggcttcgacatcgtttccggcggcgaattgctgcgcgtgctggccgccggcggcgat
ccgcgcaaggtcatcttttccggcgtgggcaagtcgcgcgaagaaatgcggctggcgctg
tcacacgatattctgtgctttaacgtggaatcgctggcggaattgcatcgtctcaacgac
gtcgccggccaagagggcaagcaggcgcctgtttcgctgcgcgtcaatccgaatgtcgac
ccgaagacgcatccgtacatttctaccgggctcaaggaaaacaagttcggcgtggcgttt
gaggaagcactggatatctaccgcacggccgcaggcttgccgcatatccgcgtaaccggc
atcgattgtcatatcggctcgcaattgctcgacgatgcccccctgctggaagcgctggac
aagctgatcgaactgatcgacaccctgagcgccgagggcatcgccatccaccacctcgac
atcggcggcggcatcggcatcgtttatgaccaggaccagccagtggccgtcggcgactat
cttggccgcctgtttgcccgcatcgatgcgtggcgcgccgcgcgccacggcaatgcaccc
atcacggtattgttcgagcccggccgctcgattgtcggcaatgccggcgtgctgatcacg
gaagtgcaatacctcaagcatggcggcgccaagaattttgccatcgtcgatgctgccatg
aatgacctgatgcgtccggccatgtatgaagcctggcatggcgtgcaggcagtgcgtcag
cgcgaaggcagcgccagcacttatgacgtggtcggcccggtatgtgaatccggtgactgg
ctggcacgcgcacgtgccctcaacatcgcgcaaggcgacttgctggcgatcctgtcagca
ggtgcctacggcatgaccatgtcgtccaactacaatacccgcggccgtgcggccgaggtc
attgtcgatggggcggaaatgcatctcgtgcgaccgcgtgagttgccggaacaattgttt
gcacaggaaaagctgctggcgtaa
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