Janthinobacterium sp. LM6: BZG29_00020
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Entry
BZG29_00020 CDS
T04756
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jal03032
]
BZG29_00020
03400 DNA repair and recombination proteins [BR:
jal03400
]
BZG29_00020
Enzymes [BR:
jal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BZG29_00020
DNA replication proteins [BR:
jal03032
]
Prokaryotic type
DNA Topoisomerases
BZG29_00020
DNA repair and recombination proteins [BR:
jal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BZG29_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AQR66920
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Position
3464..5962
Genome browser
AA seq
832 aa
AA seq
DB search
MSENPQDTPIQAKTEEYGAASIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DESLAGHCTEIHVTIHSDNSISITDNGRGVPTGLKMDDKHDPKRSAAEIVMTELHAGGKF
DQNSYKVSGGLHGVGVSCVNGLSKLLKLTIRRDGKVHHMEFVRGVPQDRQIVMVGDIATS
PIKVIGETDKRGTDVHFWADEEIFTHVEFHYEILAKRIRELSFLNNGVNIKLSDQRTGKE
EVFAFEGGTRGFVEYINKAKSVLHPTIFQATGERMSDQNTNISVDVSMQWNDAYNEQVLC
FTNNIPQRDGGTHLTGLRAAMTRVINKYIDEHEFAKKAKVEINGDDMREGLTCVLSVKVP
EPKFSSQTKDKLVSSEVRGPVEEIVAKTLADYLQEKPNDAKIICGKIVEAARAREAARKA
RDLTRRKGIMDGLGLSAKLADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRG
KVLNVEKARFEKMLSSEQITTLIATLGTSIGPDEFNVEKLRYHRIIIMTDADVDGAHIRT
LLLTLFYRQMPQLVERGHIYIAQPPLYKVKAGRDERYLKDDAEEASYMMTVALNTAVLVP
REGAEGISGETLTELVRKFNLSNTIMTRLTRVIDRAALTAIMTGVQLDLSTLDLAETSAL
ALQTAINDSAVRVHVRSDDLSEKHKLHIERMYHGNVKVTAIDADFVQGPDYAVLSSGAAT
FEGLIGEGAFVRRGEGERVKEIAVVDFHQAMQWLRDEAERTVSKQRYKGLGEMNPDQLWE
TTMDPTVRRLLKVQIEDAIAADQIFTTLMGDDVEPRRAFIENNALRAGNIDV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaatccacaagacaccccgatccaggccaaaacggaagaatacggcgccgcc
tccatccagatcctggaaggcctggaagccgtacgcaaacgcccgggcatgtacattggc
gacacctcggacggcaccggcttgcaccatctggtattcgaagtgctggacaactcgatc
gatgaatcgctggccggccactgcacggaaatccacgtcaccatccacagcgacaattcg
atctcgatcaccgacaatggccgcggcgtgccgaccggcctgaaaatggacgacaagcac
gatccgaagcgttcggcggcggaaatcgtcatgaccgaattgcacgcaggcggcaagttc
gaccagaactcgtataaagtatcgggcggtttgcatggcgtcggtgtgtcctgcgtcaat
ggtctgtcgaaattgctgaaattgaccatccgccgcgatggcaaagtgcatcacatggaa
ttcgtgcgcggcgtgccgcaagaccgccagatcgtcatggtcggcgacatcgccacctcg
ccgatcaaggtcatcggcgaaacggacaagcgcggcaccgacgtgcatttctgggccgac
gaagagattttcacgcacgtggaattccactacgaaatcctggccaagcgcatccgcgaa
ctgtccttcctgaacaatggcgtcaacatcaagctgtcggaccagcgcacgggcaaggaa
gaagtcttcgccttcgaaggcggcacgcgcggcttcgtcgaatacatcaacaaggccaag
tcggtcttgcacccgaccattttccaggccacgggcgagcgcatgtcggaccagaacacg
aatatctcggtcgacgtgtcgatgcagtggaacgatgcctacaatgaacaggtgctgtgc
ttcacgaataacatcccgcaacgcgacggcggcacccacctgacgggcttgcgcgcggcg
atgacgcgcgtgatcaacaaatacatcgatgaacacgagttcgccaaaaaggcgaaagtg
gaaatcaacggcgacgacatgcgcgaaggcctgacctgcgtcctgtccgtgaaagtgccg
gaaccgaaattctcgtcgcagacgaaggacaagctggtgtcgtcggaagtacgcggcccc
gtcgaagagatcgtcgccaagaccctggcagattacctgcaagaaaaaccaaacgacgcc
aagatcatttgcggcaagatcgtcgaagcggcgcgcgcccgcgaagcggcccgcaaggcc
cgcgacttgacgcgccgcaaaggcatcatggacggcctgggcctgtcggccaagctggcc
gactgccaggaaaaagaccccgccctgtgcgaactgtacatcgtcgagggtgactcggca
ggtggctcggcaaaacaggggcgcgaccgcaagttccaggcgattctgccgctgcgcggt
aaagtcttgaacgtggaaaaagcccgtttcgagaaaatgctgtcgtcggagcagatcacc
accctgatcgccacgctcggcacctcgatcggaccggacgaattcaacgtcgagaaactg
cgctaccaccgcatcatcatcatgaccgatgcggacgtcgacggcgcccacatccgtacc
ctgctgctgaccctgttctaccgccagatgccgcaactggtcgaacgcggccacatctac
atcgcgcaaccgccgctgtacaaggtaaaggccggccgcgacgagcgctatctgaaagat
gacgccgaggaagcgagctacatgatgaccgtggcgctgaacacggccgtgctggtgccg
cgcgaaggcgcggaaggcatttccggcgaaacgctgacggaactggtgcgcaagttcaac
ctgtcgaacaccatcatgacgcgtctgacgcgcgtcatcgaccgcgccgccctgacggcc
atcatgacgggcgtgcagctggacctgtcgacgctggacctggcggaaacctccgccctg
gccctgcagacggccatcaacgacagcgccgtgcgcgtgcatgtgcgttccgacgacttg
tcggaaaaacacaagctgcacatcgagcgcatgtaccacggtaacgtcaaagtgacggcc
atcgacgccgacttcgtgcaaggcccggactacgccgtgctgagcagcggcgccgccacc
ttcgaaggcttgatcggcgaaggcgcgtttgtgcgccgcggcgaaggcgagcgcgtcaag
gaaatcgccgtggtcgacttccaccaggccatgcaatggctgcgcgacgaagccgaacgc
accgtctcgaaacagcgctacaaaggtctgggcgaaatgaacccggatcaactgtgggaa
acaacgatggacccgaccgtgcgccgcttgttaaaagtgcagatcgaagacgccattgcg
gcggatcagatcttcaccaccttgatgggcgacgacgtggaaccacgccgcgccttcatc
gaaaacaacgcgctgcgtgcaggcaatatcgacgtgtaa
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