Janthinobacterium sp. LM6: BZG29_03535
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Entry
BZG29_03535 CDS
T04756
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jal
Janthinobacterium sp. LM6
Pathway
jal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BZG29_03535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jal03021
]
BZG29_03535
Transcription machinery [BR:
jal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BZG29_03535
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
PhyR_sigma-like
Sigma70_ECF
HTH_28
HTH_38
HTH_17
TnsD
HTH_3
HTH_Tnp_4
HTH_11
PCI
HTH_SB
HTH_24
GerE
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AQR71738
LinkDB
All DBs
Position
801551..802069
Genome browser
AA seq
172 aa
AA seq
DB search
MSTAELALQQQVSSLYTDHHHWLRGLLRRKLGNAFDAADLAHDVYLHLMKTGRMPPAGES
RRHLTQIANGLVIDLYRRRQIEAAYLEVLALVPEALAPSEEERALVIEALTEIDAVLHQL
PAKARKALLLCKLDGLSYRDIAAELQVSVSSVEKYIAAGLLACYQAMHAPDA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccgagttagcgcttcagcagcaagtcagcagtctgtacaccgaccaccat
cactggctgcgtggcttgctgcgccgtaaactcggcaatgccttcgatgcggccgacctg
gcgcacgacgtgtacctgcacctgatgaagacggggcgcatgccgccggccggggagtcg
cgccgccacctgacgcagatcgccaacggcctggtcatcgacctgtaccgccgccgccag
atcgaggccgcctacctggaagtgctggctctggtgcccgaggctctggcgccgtccgag
gaagagcgcgctctggtgatcgaggcgctgacggaaatcgatgcggtgctgcaccagctg
cccgccaaggcgcgcaaggccttgttgctgtgcaaactcgacggcctcagctatcgcgat
atcgccgccgaattacaggtgtccgtctcgtccgtcgaaaaatacatcgccgccggtttg
ctggcctgctaccaggccatgcacgcgccggacgcctga
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