Janthinobacterium sp. LM6: BZG29_05135
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Entry
BZG29_05135 CDS
T04756
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
jal
Janthinobacterium sp. LM6
Pathway
jal03030
DNA replication
jal03410
Base excision repair
jal03420
Nucleotide excision repair
jal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BZG29_05135
03410 Base excision repair
BZG29_05135
03420 Nucleotide excision repair
BZG29_05135
03440 Homologous recombination
BZG29_05135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jal03032
]
BZG29_05135
03400 DNA repair and recombination proteins [BR:
jal03400
]
BZG29_05135
Enzymes [BR:
jal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BZG29_05135
DNA replication proteins [BR:
jal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BZG29_05135
DNA repair and recombination proteins [BR:
jal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BZG29_05135
NER (nucleotide excision repair)
GGR (global genome repair) factors
BZG29_05135
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NDUC2_plant
DUF2167
Motif
Other DBs
NCBI-ProteinID:
AQR67817
LinkDB
All DBs
Position
1154772..1157534
Genome browser
AA seq
920 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRSPDGYPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDMYPEYKATRASMPDDLRLQIEPIHEAVRAMGWPILMVDGVEADDVIGTLAVQ
AAAAGMDVVVSTGDKDLAQLVNSQVTLINTMSNEKLDEAAVLVKFGVPPNRIIDYLSLIG
DTVDNVPGVSKCGPKTAVKWLTLYDSLEGVMENAAKVGGAVGENLRTALPWLPQARALIT
VKTDCDLSEHMTTIADSLVAKHEDKEALLAFFQRYGFKALLRELGATPPPMSPVGAPATA
GASTANSTGDMFADAAPAVEAVYETVLTDEQLDKWIALIDAAALTAVDTETTSLEPMTAQ
MVGISLSVAEHSACYIPLAHDYAGAPEQLTREHVLAKLRPWLEDANKPKLGQNLKYDSHI
FANHGVTLRGIAHDTLLESYVFESHKKHDMDSLALRHLNYTTIPFEDVCGKGAKQITFNQ
VEVEQAAKYAAEDADVTLRLHNAMWGNVANDEKLTFIYEKIEMPTAVVLQKIERNGVLID
DELLNIQSAELAVKILELEKKAYELAEQPFNLGSPKQIGEIFFEKLKLPVVKKTPTGAPS
TDEEVLQKLAEDYPLPKVLLEYRGMAKLKSTYTDKLPKMINVTTGRVHTNYAQAVAVTGR
LASNDPNLQNIPIRSAEGRRIREAFIAPPGSHIVSADYSQIELRIMAHISGDEAMLRAFA
DGIDIHRATAAEIFGVPAAEVQSEQRRYAKVINFGLIYGMSAFGLAGNLGVDRTAAQSYI
DRYFARFSGVKQYMEDTRQQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAPM
QGTAADLIKLAMIAVQGWLETDGLQTKMIMQVHDELVLEVPDAELELVKRKLPELMAGVA
ALKVPLTAEVGIGKNWDEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaccctgctgttagtcgacggttccagttacctctatcgtgccttccatgcg
ctgcccgacctgcgcagcccggacggttatcccacgggcgccatgcacggcatggtcaac
atgctgcgccgcctgcgcgccgactacccggccgcctatatcgcctgcgttttcgatgcc
aaaggcaaaactttccgtgatgacatgtatccggaatacaaggccacgcgcgcctcgatg
ccggacgacctgcgcctgcagatcgaaccgatccatgaagccgtgcgcgccatgggctgg
ccgatattgatggtcgacggcgtggaagcggacgacgtgatcggcaccctggccgtgcag
gctgccgccgccggcatggacgtggtggtgtcgacgggcgacaaggacctggcgcagctg
gtcaacagccaggtgaccctgatcaataccatgagcaatgaaaagctcgatgaagcggcc
gtgctggtcaagttcggcgtgccgccgaaccgcatcatcgattatctgtcgctgatcggc
gatacggtcgacaacgtgcccggcgtgtcgaaatgcggcccaaagacggccgtcaaatgg
ctgaccttgtacgacagcctggaaggcgtgatggaaaacgcggccaaggtgggcggcgcc
gtgggggaaaacctgcgcacggccctgccatggctgccgcaggcgcgcgccttgatcacc
gtcaagaccgattgcgatttgtccgaacacatgacgaccatcgccgactcgctggtggcg
aaacacgaagacaaggaagcgctgctggcctttttccagcgctacggcttcaaggccctg
ctgcgcgaactgggcgccacgccgccgccgatgtcgcccgtcggcgcgcctgcaacggct
ggcgcatcgactgcgaactccacgggcgacatgttcgccgacgcggccccagcagtcgag
gccgtgtatgaaaccgtgctgacggacgagcaactggacaaatggatcgccctgatcgat
gccgctgccctgacggccgtcgatacggaaaccacgtcgctggaaccgatgacggcgcaa
atggtcggtatttccctttcggtcgccgaacacagcgcctgctacatcccgctggcgcac
gactacgcgggcgcgcccgagcagttgacgcgcgaacacgtgctggcgaagctgcgccca
tggctggaagacgcgaacaagcccaagctggggcagaacctcaagtatgacagccacatc
ttcgccaaccacggcgtgacgttgcgcggcatcgcccacgataccttgctcgaatcgtat
gtgttcgaatcgcacaagaagcatgacatggacagcctggccctgcgccacctgaactac
acgacgatcccgttcgaggacgtgtgcggcaagggcgccaagcagatcactttcaatcag
gtcgaggtggagcaggcggcgaaatacgcggccgaggatgccgacgtgaccttgcgcttg
cacaatgccatgtggggcaatgtggcgaatgatgagaagctgaccttcatctatgaaaag
atcgagatgccgacggccgtggtcttgcaaaagatcgagcgcaacggcgtgctgatcgac
gacgaattgctcaacatccagtcggccgagctcgccgtcaagattctcgaactggaaaag
aaggcgtatgaactggccgagcagccgtttaatttaggctcgcccaagcagatcggcgaa
atcttctttgaaaagttgaagttgccggtggtcaagaaaaccccgacgggcgcgccgtcg
acggatgaagaagtgctgcaaaagctggccgaggattatccgctgcccaaagtgctgctc
gagtaccgcggcatggccaagctgaagtcgacgtataccgataaattgccgaagatgatc
aacgtcacgacgggcagggtgcacacgaactatgcgcaagccgtggccgtgacggggcgc
ctggcgtcgaacgacccgaacttgcagaatattcccatccgcagcgcggaaggccggcgc
atccgcgaagccttcattgcgccgccgggcagccacatcgtctcggccgactattcgcag
atcgaattgcgcatcatggcgcatatctcgggcgacgaagccatgctgcgcgcgtttgcc
gacggcatcgacattcaccgcgccacggccgccgaaatcttcggcgtgccggccgcggaa
gtgcagagcgagcagcgccgctatgccaaggtcatcaactttggtttgatctacggcatg
agcgcattcggcctggccggtaacctgggcgtggaccgcacggccgcgcaaagctatatc
gaccgctactttgcccgtttttccggcgtgaaacagtatatggaagacacgcgccagcaa
gcgaaggcgcgcggctacgtggaaaccgtgttcggccgccgtttgtggttgccggaaatc
aattccccgaacggcccgcgccgccagggcgccgaacgggcggcgatcaacgcgccgatg
cagggcacggccgccgacctgatcaagctggccatgatcgccgtgcaaggctggctggaa
acggatggcttgcaaacgaagatgatcatgcaggtgcacgatgaactggtgctggaagtg
ccggacgccgagctggaactggtcaagcgcaagctgccggaactgatggccggcgtggcc
gcgctgaaggtgccgttgacggccgaggtaggtatcggtaaaaactgggacgaagcgcac
taa
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