Janthinobacterium sp. LM6: BZG29_05505
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Entry
BZG29_05505 CDS
T04756
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jal03021
]
BZG29_05505
Transcription machinery [BR:
jal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BZG29_05505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
AQR67881
LinkDB
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Position
complement(1229638..1230531)
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AA seq
297 aa
AA seq
DB search
MMSATSALVPTKSNALGLGFTGNLGNIDAYISAVNRLPMLTHDEEISLATRLREKNDLAA
AQELVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMHWV
KAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKTGLDAMTPKQIDALAKLLDVKREEVI
EMETRLSGRDIALESPTDDEDDKFSPIAYLSSEQSEPTKVLEAEQVTRLQSEGLETALSK
LDARSRRIIEARWLANDDGSGATLHALAEEFGVSAERIRQIEVAALKKMKGALAAYV
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgcaacgtccgcattggttccgaccaaaagtaatgcgctgggcctcgggttc
actggcaatctgggcaatattgacgcctatatttcggccgtgaaccgcctgcccatgttg
acccacgacgaagaaatttcgctggcaacacgcctgcgcgaaaaaaatgacctggccgcc
gcgcaagaactggtgctgtcgcacctgcgcctggtggtctcgattgcccgcggctacctg
ggctatggcctgccgcacgccgacctgattcaggaaggcaatatcggcttgatgaaagcc
gtgaaacgtttcgatccggaccaaggcgtgcgcctggtgtcgtacgccatgcactgggtg
aaagccgaaatgcacgagtacatcctgaaaaactggcgcctggtcaaggtcgcgacgacg
aaggcgcagcgcaagctgttcttcaacctgcgcagccacaagacgggcctggacgcgatg
acgccgaagcagatcgatgcgctggccaagctgctcgacgtgaagcgcgaagaagtgatc
gagatggaaacgcgtttgagcggccgcgacattgctctggaatcgccgaccgacgatgaa
gacgacaagttttcgccgatcgcctacctgtcgtcggagcaaagcgaaccgaccaaggtg
ctggaagcggaacaagtgacgcgtttgcaatcggaaggcctggaaacggccctgtccaag
ctggacgcccgttcgcgccgcatcatcgaagcgcgctggctggccaacgacgacggttcc
ggcgccaccctgcacgcgctggcggaagagttcggcgtatcggccgagcgcatccgccag
atcgaagtggcggcgctgaaaaaaatgaagggcgccctggcggcctacgtgtaa
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