Janthinobacterium sp. LM6: BZG29_08930
Help
Entry
BZG29_08930 CDS
T04756
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
jal
Janthinobacterium sp. LM6
Pathway
jal00260
Glycine, serine and threonine metabolism
jal00460
Cyanoamino acid metabolism
jal00630
Glyoxylate and dicarboxylate metabolism
jal00670
One carbon pool by folate
jal00680
Methane metabolism
jal01100
Metabolic pathways
jal01110
Biosynthesis of secondary metabolites
jal01120
Microbial metabolism in diverse environments
jal01200
Carbon metabolism
jal01230
Biosynthesis of amino acids
jal01240
Biosynthesis of cofactors
jal04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BZG29_08930 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BZG29_08930 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BZG29_08930 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BZG29_08930 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BZG29_08930 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BZG29_08930 (glyA)
Enzymes [BR:
jal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BZG29_08930 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AQR68461
LinkDB
All DBs
Position
2006401..2007648
Genome browser
AA seq
415 aa
AA seq
DB search
MFAKDHNLANVDPELFAVIQKENTRQHDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVAEQLAIDRVKQLFGAECANVQPNSGSQANQGVFFAMLKPGDLIMGMS
LAEGGHLTHGMPLNMSGKWFDVVSYGLTAEEDIDYEAMERLARERKPKLIIAGASAFSKK
IDFERFSKIAKEVGAYFMVDMAHYAGLIAAGLYPNPVPFADFVTSTTHKSLRGPRGGIIL
MKAEHEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFVEYQKQVIKNADVLAKTLI
KRGLRIVSGGTESHVMLVDLRAKNLTGKEAEAILGSAHITCNKNGIPNDPQKPFVTSGIR
LGSPAMTTRGFKEAQAEEVGNLIADVLDNPHDAATIERVKAAVKVLADAHPVYAS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaagatcacaacctcgccaacgtcgatcctgaattgttcgccgtcattcaa
aaagagaacacgcgtcagcacgaccacatcgaactgatcgcgtcggagaactacacgtcg
ccagccgtaatggaagcgcaaggctcgcagctgacgaacaagtacgccgaaggctaccca
ggcaagcgctactacggtggctgcgaatacgtcgacgtggccgagcaactggccatcgac
cgcgtgaaacagctgttcggcgccgaatgcgcgaacgtgcagccgaattccggctcgcag
gcgaaccagggcgtgttcttcgccatgttgaaaccgggcgacctgatcatgggtatgtcg
ctggccgaaggcggccacctgacccacggcatgccgctgaacatgtccggcaaatggttt
gacgtcgtttcctacggtttgacggcggaagaagacatcgactacgaggcgatggaacgc
ctggcccgcgaacgcaagccgaagctgatcatcgccggcgcgtccgcattctcgaaaaag
atcgacttcgaacgcttcagcaagatcgccaaggaagtgggcgcctacttcatggtcgac
atggcccactacgcgggcctgatcgccgccggcctgtacccgaacccggtgccgttcgcc
gacttcgttacctcgaccacgcacaaatcgttgcgcggcccgcgcggcggcatcatcctg
atgaaggccgaacacgaaaaagccatcaactcggccatcttccccggcatccagggcggc
ccgctgatgcacgtgatcgccggcaaggccgtcgccttcaaggaagcgctgagccctgaa
ttcgtcgaataccagaagcaagtgatcaagaacgccgacgtgctggcgaagaccctgatc
aagcgcggcttgcgcatcgtgtccggcggcaccgaatcgcacgtcatgctggtcgacctg
cgcgccaagaacctgacgggcaaggaagccgaagccatcctcggttccgcgcacatcacc
tgcaacaagaacggcatcccgaacgacccgcaaaaaccgttcgtcacctcgggcatccgc
ctgggcagcccggcgatgacgacgcgcggtttcaaggaagcgcaagcggaagaagtgggc
aacctgatcgccgacgtgctggacaatccgcatgacgccgccaccatcgagcgcgtgaaa
gcggccgtgaaagtactggccgacgcgcaccctgtgtacgcctcataa
DBGET
integrated database retrieval system