Janthinobacterium sp. LM6: BZG29_10585
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Entry
BZG29_10585 CDS
T04756
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jal03009
]
BZG29_10585
Enzymes [BR:
jal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BZG29_10585
Ribosome biogenesis [BR:
jal03009
]
Prokaryotic type
rRNA helicases
BZG29_10585
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AQR68739
LinkDB
All DBs
Position
complement(2357521..2358945)
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AA seq
474 aa
AA seq
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MNTTSATTSFSSLPLTPAFLANLDSLGYHEMTTIQAQSLPAVLDGRDLIAQAKTGSGKTA
AFGIGILHKLNPAWFAVQGLVLCPTRELADQVANELRRLARAAGNIKILTLTGGAPMRPQ
IASLEHGAHIVVGTPGRLRDHLGRGTINLNHVQTLVLDEADRMTDMGFYEEIAGIVSACP
ARRQTLLFSATYPEDIRRATASFLVNPLEVTVEAQHDNDKIEQRFYEIGFDERNGAVGKL
LKHFKPESTLAFCNTKVHCRELAEELRQQGFSALALYGELEQRERDEILVLFANRSCSVL
VATDVAARGLDISDLGAVINVDVSKDTEVHIHRIGRTGRGSKKGLALSLCAPNEKKWVKL
IEQYQNSAAEWHDLKELAEDDGMEALPAPMVTLCIMGGKKDKLRPGDLLGALTGDAGLTK
EQVGKINVFEFMTYVALDRKVAEAAFKRLNAGNSLGRDFGNIKGRSFKMRFIEA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccacttccgccaccacttctttttccagcctgccgctgacgcccgcctttttg
gccaacctggactcgctcggctaccacgagatgaccaccatccaggcgcaaagcctgccg
gcggtgctcgatggccgcgacctgatcgcccaggcgaaaacgggcagcggcaagacggcc
gccttcggcatcggcatcctgcacaagctcaatccggcctggtttgcagtgcaaggcctg
gtgctgtgcccgacgcgcgaactggccgaccaggtggccaatgaattgcgccgcctggcg
cgcgcggccggcaacatcaagatcctgaccctgacgggcggcgcgccgatgcgcccgcaa
atcgcctcgctggaacacggcgcccacatcgtcgtcggcacgccgggccgcctgcgcgac
cacctgggccgcggcaccatcaacctgaatcacgtgcaaacgctggtgctcgatgaagcg
gaccgcatgacggacatgggcttttacgaggaaatcgccggcatcgtcagcgcctgcccg
gcgcgccgccagaccttgctgttctcggccacgtatccggaagacatccgccgcgccacg
gcgtcgttcctcgtcaatccgctggaagtgacggtcgaagcgcagcatgacaacgacaag
atcgagcagcgcttctatgaaatcggcttcgacgagcgcaatggcgccgtcggcaagctg
ttgaagcacttcaagccggaatcgaccctggccttctgcaacaccaaggtgcattgccgc
gaactggccgaagaactgcgccagcaaggcttttccgcgctggccctgtacggcgagctg
gaacagcgcgaacgcgatgaaatcctcgtgctgttcgccaaccgcagctgctccgtgctg
gtggccaccgacgtcgccgcgcgcggcctcgatatttccgacctgggcgccgtgatcaac
gtcgacgtgtcgaaggacacggaagtgcacatccaccgcatcggccgcacgggccgcggc
agcaagaagggcctggccctgtcgctgtgcgcgccgaacgagaaaaaatgggtcaagctg
atcgagcaataccagaacagcgccgccgaatggcacgacctgaaggagctggccgaggat
gacgggatggaggcgctgccggcgccgatggtcaccctgtgcatcatgggcggcaagaag
gacaagctgcgcccgggcgacttgctgggcgcgctgacgggcgacgcgggcctgaccaag
gaacaagtaggcaagatcaacgtgttcgaattcatgacctacgtggcgctcgaccgcaag
gtggccgaagcggccttcaagcgcctcaacgccggtaactccctgggccgcgacttcggc
aacatcaagggccgcagcttcaagatgcgctttatcgaggcgtaa
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