Janthinobacterium sp. LM6: BZG29_10655
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Entry
BZG29_10655 CDS
T04756
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jal03400
]
BZG29_10655
DNA repair and recombination proteins [BR:
jal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BZG29_10655
Archaeal homologous recombinant proteins
BZG29_10655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AQR68750
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All DBs
Position
complement(2373984..2375210)
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AA seq
408 aa
AA seq
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MRLLHTSDWHLGQTLHNYERGYEHQRFLDWLLDTLVAEQADVLLVAGDVFDNANPSAASQ
KQLYVFLQQARARLPALQLVVVAGNHDSAGRLEAPGPLLAAHGTHVIGHLLRDEDGQIDL
ERLLLPLTGADGQVQAWCLAVPFLRPGDVPKLPAGDTQDAYLGGIALLYRQLTDLALARR
QPGQAIVAMGHCHMVGGEMSNDSERRIVIGGTEMLPSGIFDAAIAYAALGHLHKAQAVGG
QERIRYCGSPIPLSFAEVNYRHQVLCLDIEGEQLREVRTITVPRAVPLLRVPATPAPISE
VLEQLAALDVLAAAPEAQPFLEVRVRLDAPEPGLRTRIETALDGKHVRLAKIETSSAARS
SAPENMTLDQLGQLQPDDIFRRLYLQKYGRPAPPEQLSALAELLLPGA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacttccgactggcatctgggccagaccctgcacaactatgaacgg
ggctacgaacaccagcgcttcctcgactggctgctcgacacgcttgtggccgaacaagcc
gacgtgctgctcgtcgccggcgacgtgttcgacaacgccaacccgtcggccgcctcacaa
aagcagttatatgtcttcctgcagcaggcgcgcgcgcgcctgcccgcgctgcagctggtc
gtcgtcgccggcaaccacgattcggccggccggctggaagcgcccggccccctgctggcc
gcgcacggcacccatgtgatcggccatttactgcgcgacgaagatggccagatcgacctg
gaacgcctgctgctgcctttgacgggcgccgatgggcaagtgcaagcctggtgcctggcc
gtgcctttcctgcgtcccggcgacgtgccgaaactgccggccggcgacacccaggacgcc
tacctgggaggcatcgccctactgtaccgccagctgacggacctggcgctggcgcgccgc
cagcccgggcaagccatcgtggccatgggccactgccacatggtgggcggcgaaatgtcg
aacgactcggaacgccgcatcgtcatcggcggcaccgagatgctgccctcggggattttc
gatgccgccatcgcgtatgcggcgctgggccatctgcacaaggcgcaggccgtgggcggc
caggaacgcatccgctattgtggcagtccgataccgctgtcgtttgccgaagtaaactac
cgccaccaggtgctgtgcctcgatatcgaaggcgagcagttacgcgaggtgcgcaccatc
accgtgccgcgcgccgtgccgctgctgcgcgtgcccgccacaccggcgcccatcagcgag
gtgctggaacaattggccgccctcgacgtcctcgccgccgcaccggaagcgcaaccgttc
ctggaagtgcgcgtgcgcctcgatgcgcccgaaccgggcctgcgcacgcgcatcgaaacg
gcgctcgacggcaagcacgtgcgcctggcgaagatcgaaacgtcgagcgccgcgcgcagc
agcgcgcccgagaacatgacgctcgaccagctgggccagctgcagcccgacgacatcttc
cgccgcctgtacctgcaaaaatacggccggcccgcaccgcccgaacaactgtcggccctg
gccgaactgctgctgcctggcgcctga
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