Janthinobacterium sp. LM6: BZG29_10805
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Entry
BZG29_10805 CDS
T04756
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
jal
Janthinobacterium sp. LM6
Pathway
jal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BZG29_10805
09124 Replication and repair
03420 Nucleotide excision repair
BZG29_10805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jal03021
]
BZG29_10805
03036 Chromosome and associated proteins [BR:
jal03036
]
BZG29_10805
03400 DNA repair and recombination proteins [BR:
jal03400
]
BZG29_10805
Enzymes [BR:
jal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BZG29_10805
Transcription machinery [BR:
jal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BZG29_10805
Chromosome and associated proteins [BR:
jal03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BZG29_10805
DNA repair and recombination proteins [BR:
jal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BZG29_10805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Motif
Other DBs
NCBI-ProteinID:
AQR68777
LinkDB
All DBs
Position
complement(2414428..2416692)
Genome browser
AA seq
754 aa
AA seq
DB search
MSRSTYTIAVRALCEFTAKAGDLDLRFTPSPTAQEGMAGHATVTSRRDDDYQREISLSGD
FGPLHVRGRADGYDPARRQLEEIKTYRGELDAMPANHRQLHWAQARIYGHLLCQQLNLPM
LRVALVYFDIASQKETLMHEECTAEALRLFFEQHCALFLDWAEQELAHRASRDTQLTAMA
FPHADFRPGQRQLAEAMYKASSRGCGLLAQAPTGIGKTVGSLFPMLKATAAHGLDKLFFL
AAKVPGRQMALDACAILKDSAPLLPLRVLELSAKSSACEHPDKACHGQSCPLAKGFYDRL
PLAREVALASGLILDKEAVRAIALQQAICPYYLGMELARWSDVVIGDYNYYFDLSAMLYS
MTLAHDWKVNVLVDEAHNMVSRARSMYSAELAQIDLKMLRKFAPEGLKKPLDRLSRQWTA
LLKEQDGDYHVHAALPDKFFGALQGVATAIGDYLAEHAGALDEDLQRFYFDVLLINRLAE
SFGEHSLFDVSKTDTGSTVCLRNIVPAPFLKERFAASHSTALFSATLSPWNYYSDTLGMP
ADTAWVDVESPFQAEQLSVRVADSISTRYQHRAASLLPIAQLMAKQYAEMPGNYLAFFSS
FDYMEKTAHLFAQHYPDVPLWQQPRRMDDASRAQFLGRFGLETRGIGFAVLGGAFGEGID
LPGARLIGAFIATLGLPQINPVNEQIRQRMGDIFGAGYDYTYLYPGMQKVVQAAGRVIRT
QSDKGVVYLIDDRFSRPEIRQLLPTWWDVQLANQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcagcacgtacacgatcgccgtgcgcgccctgtgcgaattcacggccaaggca
ggcgacctggacttgcgcttcaccccctcgcccacggcgcaggaaggcatggcggggcac
gccaccgtcacctctcggcgcgacgacgattaccagcgcgaaatcagcctgtccggcgac
ttcggccccctgcacgtgcggggccgcgccgacggctacgacccggcacggcgccaactg
gaagaaatcaagacctaccggggcgaactggacgccatgcccgccaaccaccgccagttg
cactgggcgcaggcgcgcatctacggccatttgctgtgccagcagctgaacctgcccatg
ctgcgcgtggcgctcgtgtatttcgatatcgcaagccagaaggaaacgctcatgcacgag
gagtgcacggccgaggcgctgcgccttttcttcgaacagcattgcgccctcttcctcgac
tgggccgagcaggaactggcgcaccgcgccagccgcgatactcaactgacggccatggcc
tttccccatgccgacttccgcccgggacagcgccagctggccgaagccatgtacaaggcc
agcagccgcggctgcggcttgctggcgcaggcgccgaccggtatcggcaagacggtgggc
agcctgttccccatgttgaaagccacggccgcgcatggcctggataaactgtttttcctc
gccgccaaagtaccgggacgccaaatggcgctcgacgcctgcgccatcctgaaggatagc
gcgcccctgctgccactgcgcgtgctggaactgagcgccaagagcagcgcctgcgaacat
cctgacaaagcctgtcatggccaatcgtgcccgctggcaaagggtttttacgaccgcttg
ccgctggcgcgcgaggtggcgctggccagcggtttgatcctggacaaggaagccgtgcgc
gccatcgccttgcagcaggctatttgcccgtattacctgggcatggaactggcgcgctgg
agcgacgtcgtcatcggcgactacaattattacttcgacctcagcgcgatgctgtacagc
atgaccctggcccacgactggaaagtcaacgtgctggtcgacgaggcgcacaatatggtg
tcgcgcgcgcgcagcatgtattcggccgagctggcgcagatcgacctgaaaatgctgcgc
aagttcgcgcccgagggcttgaaaaagccgctggaccgcctctcgcgccagtggacggcc
ttattaaaagagcaggatggcgattaccacgtgcatgcggccttgccggacaaattcttt
ggcgccctgcaaggggtggcgacggccatcggcgactacctggccgagcacgcgggggcg
ctggacgaggatttgcagcgcttttactttgacgtgctgctgatcaaccgcctggcggaa
agctttggcgagcattcgctgttcgacgtcagcaaaacggacactggctccaccgtctgc
ctccgcaatatcgtgccggcaccgtttctcaaggagcgcttcgcggccagccacagcacg
gccctgttttccgccaccctgagtccgtggaattactacagcgacaccctgggcatgcca
gccgacacggcctgggtcgacgtggaatcgccgttccaggcggaacaactgtccgtgcgc
gtggcagacagcatttctacgcgctaccagcatcgcgccgcctcgctgctgcccatcgca
caattgatggcgaagcaatacgcagaaatgccgggcaattacctggccttcttcagcagc
ttcgactacatggaaaagacggcccacttgttcgcccagcattacccagacgtgccactc
tggcaacaaccgcgccgcatggacgacgcttcccgggcgcaattcctgggccgtttcggc
ctggaaacacgcggcatcggctttgccgtgctcggcggcgcctttggcgaaggcatcgac
ttgcccggcgcgcgcctgatcggcgccttcatcgccaccctcggtttgccgcagatcaat
cccgtcaacgagcaaattcgccagcgcatgggcgacatcttcggcgccggctacgactac
acgtacttgtatccgggcatgcaaaaggtggtgcaggcggcaggcagggtcatccgcacg
caatcggacaagggcgtcgtctacctgatcgacgaccgtttttcccgcccggaaatccgc
cagctgctgcccacgtggtgggatgtgcagctagccaaccagtaa
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