Janthinobacterium sp. LM6: BZG29_14030
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Entry
BZG29_14030 CDS
T04756
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jal03032
]
BZG29_14030
03400 DNA repair and recombination proteins [BR:
jal03400
]
BZG29_14030
Enzymes [BR:
jal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BZG29_14030
DNA replication proteins [BR:
jal03032
]
Prokaryotic type
DNA Topoisomerases
BZG29_14030
DNA repair and recombination proteins [BR:
jal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BZG29_14030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
AQR69338
LinkDB
All DBs
Position
complement(3194899..3195948)
Genome browser
AA seq
349 aa
AA seq
DB search
MEISATTTARAAGLRYTGDHQSGIARLGKPGKFRYRDGDGQFLRDAAALTRIKALAIPPA
WTDVWICPHANGHLQATGRDARGRKQYRYHARWRQVRDEVKYERMLSFGRALPAIRAAVA
RGMQLPGLPREKVLATIVHLLELTMMRIGNEEYARTNRSFGLTTLRTRHVQLDGSAVAFH
FKGKSGVRHDIRLSDRRLARVLARMRELPGQELFQYVDEDGARHGVDSGDVNDYLREVTG
EDYTAKDFRTWSGTLLAALALQAFEQVDSEAQAKKNIVQAIESVAKKLGNTPTICRKCYV
HPAVLESYLDGSLWEGMRARARQQLQENLPALAPEEAAVLALLQQRLQA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatccgccaccaccacggcccgcgcggccggcctgcgctatacgggcgaccat
caaagcggcatcgcccgcctgggcaagcccggcaagttccgctaccgcgacggggacggc
cagttcctgcgcgatgccgccgccttgacgcgcatcaaggcactggccataccgcccgcc
tggacggacgtgtggatctgcccgcacgccaacggccacctgcaggcgacgggccgcgat
gcacggggccgcaagcagtaccgctaccatgcgcgctggcgccaggtgcgcgacgaagtg
aaatacgagcgcatgctcagctttggccgcgccctgcccgccatccgcgccgccgtcgcg
cgcggcatgcagctgccgggcctgccccgtgaaaaagtactggccaccatcgtgcacttg
ctggaattgacgatgatgcgcatcggcaacgaagaatatgcgcgcaccaatcgatcgttc
ggcctgacgaccttgcgcacgcgccatgtgcagctcgacggcagcgccgtggccttccac
ttcaagggcaagagcggcgtgcgccacgatatccgcctgagcgaccggcgcctggccagg
gtgcttgcgcgcatgcgcgagctgcccgggcaggaactgtttcaatatgtcgatgaggat
ggcgcgcgccacggcgtcgattcgggcgacgtcaacgattatctgcgcgaggtgacgggc
gaagactacacggccaaggatttccgcacctggtccggcaccctgctggccgcgctggcc
ctgcaggcattcgagcaggtcgattccgaggcgcaagcgaagaaaaacatcgtgcaggcg
atcgagtcggtggcaaaaaaactgggcaacacgccgaccatctgccgcaagtgctatgtg
cacccggccgtgctggaatcgtatctggatggcagtttatgggaaggcatgcgcgcgcgg
gcgcggcagcaattacaggaaaacttgccggcgctggcgccggaagaagcggccgtgctg
gccttgctgcagcagcgcctgcaggcttga
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