Janthinobacterium sp. LM6: BZG29_14220
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Entry
BZG29_14220 CDS
T04756
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jal
Janthinobacterium sp. LM6
Pathway
jal03030
DNA replication
jal03430
Mismatch repair
jal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BZG29_14220
03430 Mismatch repair
BZG29_14220
03440 Homologous recombination
BZG29_14220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jal03032
]
BZG29_14220
03400 DNA repair and recombination proteins [BR:
jal03400
]
BZG29_14220
Enzymes [BR:
jal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BZG29_14220
DNA replication proteins [BR:
jal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BZG29_14220
DNA repair and recombination proteins [BR:
jal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BZG29_14220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AQR71963
LinkDB
All DBs
Position
3237080..3237703
Genome browser
AA seq
207 aa
AA seq
DB search
MFDKPIVMIDFETTGLSPDMGDRITEVAALRIEGGQITDRYVTLINCNARIPSFITGLTG
ITQAMVDKAPPVAEVVPQLLDFIGSDALSAHNASFDEKFLRAESARLNLTPAHQSLVCSL
KLSRRVFPGMASYKLGLLSSQLGIAFKSAAHRAESDAEVAAQVLIHIGRHLRSSYGIADV
DADLLVSLNKLAAAKVPQFLQKHPSRR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacaaaccgatcgtcatgatcgacttcgagacgaccggtttatctcccgacatg
ggcgaccgcatcacggaagtggcggcgctgcgcatcgagggcgggcagatcacggaccgc
tatgtgaccttgatcaactgcaatgcgcgcatcccctcgttcatcacgggcttgacgggc
atcacgcaggcgatggtggacaaggcgccgcccgtggccgaggtagtgccgcagctgctg
gattttatcggcagcgatgccttgtcggcgcacaatgccagcttcgatgaaaaattcctg
cgcgcggaaagcgccaggctgaacctgacacctgcgcaccagtcgctcgtgtgttccctg
aaactgtcgcgccgcgtgtttcccggcatggccagctacaagctggggctgctgtccagc
cagctgggcatcgccttcaagagtgccgcccacagggccgaatccgatgcggaagtggcg
gcgcaagtgctgatccatatcggccgccatttgcgcagcagctatggcatcgccgacgtc
gacgcggacttgctggtctcgctgaacaagctggccgccgccaaggtgccgcaattcctg
caaaaacacccatcacgccgctga
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