Janthinobacterium sp. LM6: BZG29_16640
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Entry
BZG29_16640 CDS
T04756
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jal
Janthinobacterium sp. LM6
Pathway
jal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BZG29_16640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jal03021
]
BZG29_16640
Transcription machinery [BR:
jal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BZG29_16640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
HTH_28
HTH_29
DUF1670
GerE
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AQR69769
LinkDB
All DBs
Position
complement(3789712..3790218)
Genome browser
AA seq
168 aa
AA seq
DB search
MNIAQSGESIAVIYSNHHGWLMRWLRAKLQCADHAADLAQDTFVRLLAAPPEGRQSLREP
RAYLTTVAQRLLIDHYRRLSLEQAWLETLAQQPDLLMQSPEERLLVLEALQRIDAMLDGL
PPLVRSAFLLAHVDGMAYGEIARRLAVSERSIKRYMVQAFERCILLIL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtgaacattgcgcaatccggcgaatcgatcgcggtcatctacagcaatcaccacggctgg
ctgatgcgctggctgcgcgccaagctgcagtgcgccgaccatgcggccgacctggcgcag
gataccttcgtgcgcctgctggcggcgccgcccgagggccggcagagcctgcgcgaaccg
cgcgcctatctcaccaccgtggcgcagcgcctgctgatcgaccattaccggcgcctgtcg
ctggagcaggcgtggctggaaacgctggcgcagcagcccgatctgctgatgcagtcgccg
gaagagcgcttgctggtactggaagccttgcagcgcatcgatgccatgctcgacggcttg
ccgccgctcgtgcgcagcgcttttttgctggcgcatgtcgatggcatggcgtacggggaa
atcgcccggcgcctggccgtgagcgagcgcagcatcaagcgctacatggtgcaggccttc
gaacgctgcatcctcttgatcctgtga
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