KEGG   Janthinobacterium sp. LM6: BZG29_16640
Entry
BZG29_16640       CDS       T04756                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
jal  Janthinobacterium sp. LM6
Pathway
jal02020  Two-component system
Brite
KEGG Orthology (KO) [BR:jal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BZG29_16640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jal03021]
    BZG29_16640
Transcription machinery [BR:jal03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BZG29_16640
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF PhyR_sigma-like HTH_23 HTH_28 HTH_29 DUF1670 GerE HTH_11
Other DBs
NCBI-ProteinID: AQR69769
LinkDB
Position
complement(3789712..3790218)
AA seq 168 aa
MNIAQSGESIAVIYSNHHGWLMRWLRAKLQCADHAADLAQDTFVRLLAAPPEGRQSLREP
RAYLTTVAQRLLIDHYRRLSLEQAWLETLAQQPDLLMQSPEERLLVLEALQRIDAMLDGL
PPLVRSAFLLAHVDGMAYGEIARRLAVSERSIKRYMVQAFERCILLIL
NT seq 507 nt   +upstreamnt  +downstreamnt
gtgaacattgcgcaatccggcgaatcgatcgcggtcatctacagcaatcaccacggctgg
ctgatgcgctggctgcgcgccaagctgcagtgcgccgaccatgcggccgacctggcgcag
gataccttcgtgcgcctgctggcggcgccgcccgagggccggcagagcctgcgcgaaccg
cgcgcctatctcaccaccgtggcgcagcgcctgctgatcgaccattaccggcgcctgtcg
ctggagcaggcgtggctggaaacgctggcgcagcagcccgatctgctgatgcagtcgccg
gaagagcgcttgctggtactggaagccttgcagcgcatcgatgccatgctcgacggcttg
ccgccgctcgtgcgcagcgcttttttgctggcgcatgtcgatggcatggcgtacggggaa
atcgcccggcgcctggccgtgagcgagcgcagcatcaagcgctacatggtgcaggccttc
gaacgctgcatcctcttgatcctgtga

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