Janthinobacterium sp. LM6: BZG29_20765
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Entry
BZG29_20765 CDS
T04756
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
jal
Janthinobacterium sp. LM6
Pathway
jal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BZG29_20765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jal03019
]
BZG29_20765
03016 Transfer RNA biogenesis [BR:
jal03016
]
BZG29_20765
Enzymes [BR:
jal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BZG29_20765
Messenger RNA biogenesis [BR:
jal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BZG29_20765
Transfer RNA biogenesis [BR:
jal03016
]
Prokaryotic type
tRNA degradation factors
BZG29_20765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
KH_KhpA-B
OB_RRP5_4th
DUF5813
KH-I_KHDC4-BBP
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AQR70478
LinkDB
All DBs
Position
complement(4737845..4739962)
Genome browser
AA seq
705 aa
AA seq
DB search
MFNKVTKTFQYGQHQVTLETGEIARQASGAVLVSIEDTVVLATVVARKDAKPGQDFFPLT
VDYVEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSV
NPEIDPDIAAMIGASAALCVSGVPFNGPIGAARVGYANGQYILNPTVQQLKTSEMDLVVA
GTETAVLMVESEAKQLSEEIMLGAVVFGHDQMKVVIDAIHDLVRDGGKPEVEWAPAPKNE
ALIARVAHFANAKINDAYQTKDKQERTAKLKAATSEVIADLSAEAAAAGGASIDSAEVNN
ILFDIEAKIVRTQILDGEPRIDGRDTRTVRPISIRTSVLPRTHGSALFTRGETQALVVAT
LGTARDSQKIDALMGEFTDSFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAAL
PAAEEFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKEHVAGIAMGLIKEGGKF
AVLSDILGDEDHLGDMDFKVAGTRNGITALQMDIKIMGITKEIMQVALAQAKEGREHILG
EMQKAMPHVKTELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVV
TIASVDAAAGQEAKRRIEELTASVEVGKTYEGTVLKLLDFGAIVQVMPGKDGLLHISQIA
NERVNAVADYLKEGQLVRVKVLETDDRGRLKLSMKAAEGNEAPAA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaagttacgaaaaccttccagtacggtcaacatcaagtgaccctggaaacc
ggcgaaatcgctcgtcaggcatccggcgcagtgctggtgtcgatcgaagataccgtcgtt
ctggcaacggtagtggcacgcaaagatgccaagccaggccaggatttcttccctttgacg
gttgattatgtcgagaaaacctatgctgccggtaaaatcccgggcggttttttcaagcgc
gaaggccgtccttccgaaaaagaaacactgacatcgcgtctgatcgaccgtcctatccgt
ccgctgttcccggaaggctacctgaatgaagtgcaagtcatcattcacgtgctgtcggtc
aaccctgaaatcgatccggacatcgccgccatgatcggcgcatcggccgccctgtgcgta
tcgggcgtgcctttcaacggtcctatcggcgccgcgcgcgtcggttacgccaatggccag
tacatcctgaacccgaccgtccagcagctgaaaacgtcggaaatggacctggttgtcgcc
ggtaccgaaacggccgtgctgatggtcgaatcggaagcgaaacagctgtccgaagaaatc
atgctgggcgccgtggtcttcggccacgaccagatgaaagtcgtcatcgacgcgattcac
gacctggtgcgtgacggcggcaagccggaagtggaatgggcgcctgcgccgaaaaacgaa
gcactgatcgcccgcgtcgcgcatttcgccaacgccaagatcaatgacgcgtatcaaacc
aaggacaagcaagagcgcacggccaagctgaaagcggcgacgtcggaagtgatcgccgac
ctgtcggccgaagcggctgccgccggcggcgcgtcgatcgacagcgctgaagtcaacaac
atcctgttcgacatcgaagccaagatcgtgcgtacgcagatcctggacggcgagccacgc
atcgacggccgcgacacgcgcaccgtgcgtccgatctcgatccgcaccagcgtgctgcca
cgcacccacggttcggccctgttcacgcgcggcgaaacgcaggcgctggtcgtcgccacc
ctgggcaccgcccgcgacagccagaagatcgacgcgctgatgggcgagttcaccgattcg
ttcatgctgcattacaacatgcctccgttcgccaccggcgaaacgggccgtgtcggtacg
ccaaaacgccgtgaaatcggccacggccgcctggccaagcgcgcgctgatcgccgccttg
ccagcagctgaagagttcagctactcggtgcgcctggtatcggaaatcacggaatcgaac
ggttcctcgtcgatggcatcggtgtgcggcggctgcctggcactgatggacgccggcgtg
ccgatgaaagaacacgtggccggtatcgccatgggcctgatcaaggaaggcggcaagttt
gccgtgctgtccgacatcctgggcgacgaagatcacctgggcgacatggacttcaaggta
gccggtacccgcaacggtatcacggcgctgcagatggacatcaagatcatgggcatcacc
aaggaaatcatgcaagtggcactggcgcaagccaaggaaggccgcgagcacatcctgggc
gaaatgcaaaaagccatgccgcacgtcaaaaccgaactgtccgatttcgcaccgcgtctg
atcaccatcaagatcaacccggaaaaaatccgtgacgtgatcggcaagggcggcgccgtg
atccgcgcgctgaccgaagagacgggcacccagatcgacatcagcgacgaaggcgtggtc
accatcgcttccgtcgacgccgctgccggccaggaagccaagcgccgcatcgaagaactg
acggcatccgtcgaagtgggcaagacctacgaaggcaccgtgctgaaactgctggacttc
ggcgccatcgtgcaagtcatgccaggcaaggacggcttgctgcacatttcgcagatcgcc
aacgagcgcgtcaacgccgtggccgactacctgaaagaaggccagctggtgcgtgtaaaa
gttctggaaacggacgaccgcggccgcctgaaactgtcgatgaaagctgccgaaggcaac
gaagcgccagccgcttaa
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