Janthinobacterium sp. LM6: BZG29_21310
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Entry
BZG29_21310 CDS
T04756
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jal03009
]
BZG29_21310
Enzymes [BR:
jal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BZG29_21310
Ribosome biogenesis [BR:
jal03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BZG29_21310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
TRAM
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_32
Methyltrans_SAM
Methyltransf_23
Methyltransf_11
UPF0020
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AQR70572
LinkDB
All DBs
Position
complement(4849053..4850393)
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AA seq
446 aa
AA seq
DB search
MQENIIEIKSLDMDARGVGHIENEDGSPGKVVFVEGALPGERVSFVTFKKKKNWEMARMT
ALHRESSMRVTPKCKHFDNCGGCSMQHLEPSAQVAIKQRVLEDNLWHIGKVRPQSIMRPM
YGPTWGYRYRARLSVRHVKKKDAVLVGFHEKKSAFVADMDSCEILPPHISAMLLPLRGLI
ASLSIFDQMPQIELAVGEDVTAMVLRIMAPLTADDETKLKAFADEYGVQWWLQVKGPETA
VPFYPLDKQLHYLLPEFGVKMPFKPVDFTQVNHHINRVLVSKALRLLEVQPTDRVADLFC
GLGNFTLPLATQGSEVVGIEGSTTLTERALENALANGLAEKTSFSTRNLFEVTTDDLIAL
GKFDRILVDPPRDGAMALCQALVGLSQVRPDMLPKRIVYVSCSPSTLARDAGILALEAGY
VLSKAGVVNMFPHTSHVESMAVFDLI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatatcatcgaaatcaaatcgctcgacatggacgcccgtggcgttggccat
attgagaacgaagacggctcgccgggcaaggtcgtgtttgtcgaaggcgcgctgccgggc
gagcgcgtcagctttgtgacgttcaagaagaagaaaaactgggaaatggcccgcatgacg
gcgctgcaccgcgagtcatcgatgcgcgtgacgcccaagtgcaagcatttcgacaattgc
ggcggttgctcgatgcagcacctggagccgtcggcccaggtggcgatcaagcagcgcgtg
ctggaagacaacttgtggcatatcggcaaggtacgtccgcaaagcatcatgcgccccatg
tatggcccgacgtggggctaccgctaccgcgcgcgcctgtccgtgcgccacgtcaagaag
aaagacgccgtgctggtgggcttccatgaaaagaaatcggcgttcgtggccgacatggac
agctgcgaaatcttgccgccgcacatctcggccatgctgctgccgctgcgtggattgatt
gcctcgttgtccatcttcgaccagatgccgcagatcgagctggccgtcggtgaagacgtc
accgccatggtcttgcgcatcatggcgccattgacggcggatgacgaaacgaaattgaag
gcttttgccgacgagtacggcgtgcaatggtggctgcaggtgaagggcccggaaacggcc
gtgccgttctatccgctcgacaagcaattgcactacctgctgccggaattcggcgtcaag
atgccgttcaagcccgttgattttacgcaagtgaaccaccacatcaaccgcgtgctggtg
tcgaaagccctgcgcctgctggaagtgcagccgaccgaccgcgtggccgacttgttctgc
ggcctgggcaatttcaccctgccgctggccacgcagggcagcgaagtggtgggcatcgaa
ggcagcaccaccctgacggagcgggcgctggaaaacgcgctggccaatggcctggcggaa
aaaacctcgttctcgacgcgcaacctgttcgaagtgacgacggacgacctgatcgcgctg
ggcaagtttgaccgcatcctcgtcgacccgccgcgcgatggcgccatggccctgtgccag
gcgctggtcggcctgtcgcaagtgcgtccggacatgctgccgaagcgcatcgtgtacgtg
tcgtgcagcccgtccaccctggcgcgcgacgccggcatcctggcgctggaagcgggctat
gtgctgagcaaggcgggcgtggtgaacatgttcccgcatacttcgcacgtcgaatcgatg
gcggtgtttgatttgatctga
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