KEGG   Janthinobacterium sp. LM6: BZG29_23735
Entry
BZG29_23735       CDS       T04756                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
jal  Janthinobacterium sp. LM6
Pathway
jal02020  Two-component system
Brite
KEGG Orthology (KO) [BR:jal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BZG29_23735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jal03021]
    BZG29_23735
Transcription machinery [BR:jal03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BZG29_23735
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF PhyR_sigma-like HTH_28 HTH_23 GerE HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: AQR70991
LinkDB
Position
5398389..5398931
AA seq 180 aa
MPGSPFAPSPLLPTQLENHYRAHHGWLAHWLQRRLGNAFDAADLMQDTFARLLAGTPAQP
QTPALRAPKAYLATVAKHLLINHLRRQSLERAWLAALAALPEQHLPSTEQRVEILQALQA
VDAMLDGLKPKVRAVFILAQIEGHAYADIAAQLGIGERSVKRYMAEALTECVLLAPDLLP
NT seq 543 nt   +upstreamnt  +downstreamnt
atgccaggcagtccgttcgcgccctctcccctgctgcccacgcagctggaaaaccattac
cgcgcgcaccatggctggctggcacactggctgcagcggcgcctgggcaatgcttttgat
gcggccgacctgatgcaggataccttcgcgcgcctgctggccggcaccccggcacagccg
caaacgccggccctgcgcgcgccgaaagcctacctggcgaccgtcgccaaacacctgctg
atcaaccacttgcgccgccagtcgctggaacgcgcgtggctggcagcactcgctgccctg
cccgaacagcatctgccatcgaccgagcagcgcgtggaaatcctgcaggcgctgcaagcg
gtcgatgccatgctcgacggcctgaaaccgaaggtgcgcgccgtcttcatcctggcgcag
atcgaaggccatgcctatgcggacatcgccgcgcaactgggcatcggtgagcgctccgtg
aagcgctacatggccgaggcgctgaccgaatgcgtgctgctggcgccggacctgctgcca
tga

DBGET integrated database retrieval system