Janthinobacterium sp. LM6: BZG29_25015
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Entry
BZG29_25015 CDS
T04756
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
jal
Janthinobacterium sp. LM6
Brite
KEGG Orthology (KO) [BR:
jal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jal03400
]
BZG29_25015
Enzymes [BR:
jal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BZG29_25015
DNA repair and recombination proteins [BR:
jal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BZG29_25015
Prokaryotic type
BZG29_25015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
TPMT
Usp
Motif
Other DBs
NCBI-ProteinID:
AQR71217
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All DBs
Position
5689556..5691019
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AA seq
487 aa
AA seq
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MTIKTSLVWFRRDLRAFDHAALHHALRQSQAVHCVFVYDTAILAALPRRDRRVDFIHASL
AELAGELRQLGGDLIVLHADAAEAIPRLAAELNADAVFANHDYEPQAIARDATVAAALTR
DARLWFSFKDQVIFEKDEVLTLSAKPYTVYTPYKNAWLKKMRAEPGCLAPFAIEPHAASL
APPRNGTPAPLPTLGELGFEASNLAELAIPTGMSGASQLFEDFLQRVARYDVARDFPALK
GPSYLSMHLRFGTVSLRYLVRTIVDLMDRGGGGDGAPVWLAELIWRDFYAMILYQNPHVE
GGAFKPAYDAIAWETGAEADAAFAAWCEGRTGYPLVDAAMAQLNQTGYMHNRLRMVTACF
LIKDLGIDWRRGEAYFALHLNDFDLASNNGGWQWASSSGCDAQPYFRIFNPITQSEKFDA
GGRFIRRYLPQLKALGDKEIHAPWLVPRMLLEQKNIVLGCDYPEPLVQHDEARKETLERY
AVVKVVT
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaagacttccctggtgtggttccggcgcgatctgcgcgcgtttgaccatgct
gcactgcatcacgccctgcgccaaagccaggccgtgcattgcgtcttcgtgtacgacacc
gctatcctggcggccctgccgcgccgcgaccggcgggtcgacttcatccacgccagcctg
gccgagctcgctggcgagctgcgccagctgggcggcgacctgatcgtgctgcacgcggac
gcggccgaggccatcccgcgcctggccgccgaattgaacgccgacgccgtctttgccaac
cacgactacgaaccgcaagccatcgcgcgcgacgccacggtggccgccgctctcacgcgc
gacgcgcgcctgtggttcagtttcaaggaccaggtgatctttgaaaaggacgaagtgctg
acgctctcggccaagccgtataccgtctacacgccgtacaagaatgcctggctgaagaaa
atgcgcgcggaacccggctgcctggcgccgttcgccatcgagccgcatgcggccagcctg
gcgccgccgcgcaatggcacgccggcgcccctgcccaccttgggcgagctgggtttcgag
gccagcaacctggcagaactggccattcccaccggcatgtcgggcgccagccaactgttc
gaggattttttacaacgcgtggcccgctatgacgtggcgcgcgatttccccgccttgaag
ggaccgtcctacctgtccatgcatctgcgcttcggcaccgtgtcgctgcgctacctggtg
cgcaccatcgtcgacctgatggaccggggcggcggcggcgatggcgcacccgtgtggctg
gccgaactgatctggcgcgatttctacgccatgatcctgtaccagaacccgcatgtggaa
ggcggcgccttcaagccagcctacgacgccatcgcctgggaaacaggagccgaggccgat
gccgcctttgcggcctggtgcgaggggcgcaccggctatccgctggtggacgcggcgatg
gcacagctgaaccagacgggctacatgcacaaccgcctgcgcatggtcacggcctgcttc
ctgatcaaggacctgggcatcgactggcgccgcggcgaagcgtatttcgcgctgcacctg
aatgacttcgacctggcgtcgaacaacggcggctggcaatgggcgtcctcgtccggctgc
gacgcccagccctacttccgcatcttcaatccgatcacgcaatcggaaaaattcgatgcc
ggcgggcgcttcatccgccgctacctgccgcagctgaaggcgctgggcgacaaggaaatt
cacgcgccctggctggtgccgcgcatgctgctcgagcaaaaaaacatcgtgctggggtgc
gactatccggaaccgctggtgcagcacgacgaggcgcgcaaggagaccctggaacgttat
gccgtggtgaaagtggtgacgtag
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