Jannaschia sp. CCS1: Jann_0086
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Entry
Jann_0086 CDS
T00330
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jan03009
]
Jann_0086
Enzymes [BR:
jan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Jann_0086
Ribosome biogenesis [BR:
jan03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Jann_0086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
PSD5
Motif
Other DBs
NCBI-ProteinID:
ABD53003
UniProt:
Q28WA9
LinkDB
All DBs
Position
80706..81965
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AA seq
419 aa
AA seq
DB search
MRSLRQCPVPEVTITRLGHLGDGIATDDHGGPIFVPLTLPGEVVSGEIYGDRIAAPSVIT
PSSDRVKAPCPHYKSCGGCSLMHASDPFVATWKENVITTALQAHDLPTPLRPIVTSARKS
RRRATLAGTRTKKGAMIGFHARKSGTIVPTRDCFLLEPALLETLPALERIVKLGASRSAT
LGLALTLTDTGIDLHVTGAKPLDGPLRAALPQVRGSFSRLTWGDEPVYTETPPRLTLGTA
RVTPPPGAFLQATQDGEAALQAAVAEATQGATHIADLFCGIGTFTLPLAQAAPVHAVEAA
PDLLDALDHATRFATGLKPITTEARDLYRRPLLPDELAKFDAIVIDPPRAGAEAQTEQIA
KAHVPVIAAVSCNPVTFARDAAILTKAGYALDWVQPVDQFRWSPHVELAARFTLAHISD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctctccggcagtgccccgtgcctgaggtcacaatcacccgcctcggccacctt
ggagacggcatcgcgactgacgatcacggtggccccatcttcgtgccgctgacccttccc
ggagaggtcgtgtccggggagatctacggcgaccgcatcgccgccccgtctgtgatcaca
ccctcgtccgatcgcgtgaaagcgccctgcccgcactacaaatcctgtggcgggtgcagt
ttgatgcatgcctccgacccgtttgtcgcgacgtggaaagaaaatgtgatcacaacggct
ttgcaggcccacgatcttcccacacccctgcgccccatcgtgacctccgcccgcaagtcc
cgccgtcgggcaacccttgccggtacgcgcaccaagaagggggcgatgatcgggtttcac
gcgcgcaaatcaggcactattgtgccgactagagactgcttcttgctggaaccggccctg
ctggaaaccctccctgcgctggagagaattgtgaaactgggcgcgtcacgttcggccact
ttgggtctggcgctcacgctcacggataccggcatcgacctgcatgtgacgggtgcaaaa
ccccttgatggaccgcttcgcgccgcgcttccgcaggtgcggggcagcttttcgcgcctc
acttggggggatgagcctgtctataccgaaacgccaccccgcctgacccttggcaccgcc
cgcgtcacgcctccgccgggcgcatttctacaggccacacaagacggggaagccgcgctg
caggcggcggtcgcagaggcaacgcagggcgccacacacatcgcggacctgttctgcggc
atcggtacattcaccctgcccctcgcccaagccgcgcccgttcatgccgttgaggccgcg
ccggacctgctcgacgcgcttgatcatgccacacgctttgccaccggcctcaagcccatc
acgaccgaggcgagagacctctaccgccgcccccttctgcctgatgagctggcaaaattc
gacgcaatcgtcatcgacccgcctcgcgcgggtgccgaggcgcaaaccgaacagatcgcc
aaagcgcacgtacccgttatcgctgccgtctcctgcaatcccgtgaccttcgcgcgcgat
gccgcgatcttaacgaaagcgggctatgcgctggattgggtgcaacccgtcgatcaattc
cgctggtcgccccatgtggaacttgcggcgcggttcacccttgcccatatcagcgattaa
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