Jannaschia sp. CCS1: Jann_0194
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Entry
Jann_0194 CDS
T00330
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan03030
DNA replication
jan03430
Mismatch repair
jan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Jann_0194
03430 Mismatch repair
Jann_0194
03440 Homologous recombination
Jann_0194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jan03032
]
Jann_0194
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_0194
Enzymes [BR:
jan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Jann_0194
DNA replication proteins [BR:
jan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Jann_0194
DNA repair and recombination proteins [BR:
jan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Jann_0194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABD53111
LinkDB
All DBs
Position
complement(185734..186429)
Genome browser
AA seq
231 aa
AA seq
DB search
MREIVLDTETTGLNPYDMPRHRIVEIGAVEIFNQVPTGKTYHQYIQPERDMPKEAFDVHG
IGEDFLADKPIFADIAQDFLDFVGGDQMVIHNAEFDMRFLNAELEWAGKHALPNDQALDT
LKIARQKFPGSPASLDALCRRFGIDNSAREKHGALLDSEILAEVYLELTGGKQPDFGLSQ
SKSTPTQQQDENWRPRPRPSALPTRLSDVEKAAHAAFVDALGDQTVWSKFR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtcctcgatactgaaacgaccggtcttaacccctacgacatgccgcgc
caccgtatcgtggagatcggtgccgtagagattttcaatcaggtgcccacgggcaagacc
tatcaccaatatatccagcctgagcgtgacatgccgaaagaggcgtttgatgttcatggc
atcggtgaagattttctggctgataagcccatttttgcagatatcgcccaggattttctt
gatttcgtgggtggagaccagatggtcatccacaacgctgaattcgacatgcgcttccta
aatgccgagttggaatgggccggcaagcacgcacttcccaacgatcaagcgctcgacacg
ctgaaaattgctcgtcaaaagttcccgggttctcccgcatcgcttgatgctttgtgtcgc
cggtttgggatcgacaattcagcgcgggaaaagcacggggccttgctcgattccgagatt
ttggcagaggtgtatctggagctgacaggcggcaaacagccggactttggtctgtcccaa
agcaagtcaacaccgacccagcagcaggatgaaaactggcgcccgcgtccacgccccagc
gcgctaccaacccgattatcagatgtcgaaaaggccgctcatgcagcctttgtcgatgct
ttgggtgatcaaaccgtctggtcgaaattccgctga
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