Jannaschia sp. CCS1: Jann_0209
Help
Entry
Jann_0209 CDS
T00330
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
jan
Jannaschia sp. CCS1
Pathway
jan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Jann_0209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_0209
DNA repair and recombination proteins [BR:
jan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Jann_0209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
SufE
Motif
Other DBs
NCBI-ProteinID:
ABD53126
UniProt:
Q28VY6
LinkDB
All DBs
Position
complement(199959..202592)
Genome browser
AA seq
877 aa
AA seq
DB search
MNAQVTPMMAQYLEIKAAHPDALLFYRMGDFYEMFFDDAVAAAEALDIALTKRGKHNGED
IAMCGVPAHSAESYLLTLIRKGFRVGICEQMEDPATAKKRGGSKAVVRREVVRLVTPGTL
TEDTLLEARRHNYLASYADVRGEGALAWCDISTGDFRVMRCPAVRLGPELARLSPKEVLV
SDGLDIARQDAIIELGAAVTPLSPGSFDSASAEQRLAGLFSVSTLEGFGNFARAEVSAMG
ALIDYLELTQKGALPLLRAPRQQSADRLLQLDTATRRNLELTQALSGGRANSLLSVLDRT
QTAGGARLLQRRLTGPSTDLDVIRARHESVSFFFSDTLIRDDLEAELRRIPDLDRALSRL
ALDRGGPRDLSAIRDGLSGAARLSDKLKIVDLPPLLEGAVQDLQGHDELSALLDEALVAE
PPVQLRDGGLIAPGYHAELDEARTLRDEGRSVIATMQADYVEATGVNALKIKHNNVLGYF
IETTATHAEKMLNPPLSERFIHRQTTANQVRFTTVELSELETKILNAGNRALEIERVLFQ
SLRDAILNCQDQIGQAARGLAELDLSAALARRAREGDWTQPEMTEDRAFMIEGARHPVVE
AALAKDGTSFVANDCDLSAEGGAAITLLTGPNMAGKSTYLRQNALLVIMAQTGSFVPAKC
AKIGLVSQVFSRVGASDDLARGRSTFMVEMVETATILNQADDRALVILDEIGRGTATYDG
LSIAWATLEHLHETNQCRALFATHYHEMTSLASKLDGLTNATVAVKEWEGEVIFLHEVRE
GAADRSYGVQVAKLAGLPDAVIARAQVVLDALEKGEREGGERKAVIDDLPLFAMMPAPAP
APSAPSLVEEKLRAVHPDEMTAREALNLLYELKAELS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcaagtgacgccgatgatggcgcaatatctggagatcaaggcagcacatccc
gatgcactgctgttctaccggatgggcgacttctacgagatgttctttgatgatgccgtc
gcggcggccgaggcgttggacatcgcgttaaccaagcgcggcaagcacaacggcgaagat
atcgccatgtgtggcgtgcctgcccattcagcggagagctatctactgacgctgatccgc
aagggctttcgtgtcggtatttgcgaacagatggaggaccccgcgaccgcaaagaaacgc
ggtgggtccaaggccgtggtgcggcgggaggtcgtgcggctggtgacacccggcacgctg
accgaagacacattgcttgaggcgcggcggcacaattacctcgcatcttacgccgacgtt
cgcggcgaaggcgcgttggcgtggtgcgatatctccaccggagacttccgcgtgatgcgc
tgtccggcggtgcgtttggggccggaattggcgcggttgtcgccaaaggaagtgcttgtg
tccgacggattggatatcgcacgccaggacgcgatcatcgagttgggcgcggccgtgacg
ccattatcacccggctctttcgacagcgcctctgcggaacagcggctggcgggtttgttc
agcgtcagcaccttggaggggttcgggaacttcgcccgcgccgaggtgtccgccatgggt
gcgctgatcgactatctggaattgacccagaaaggcgcactgccgctgcttcgtgcaccg
cgacagcaatcggcggatcgtctgctacagcttgataccgccacccgacgcaatctggag
ctgacccaagcgctatctggcgggcgggccaattcactactgtcggtgctggatcggaca
caaactgcgggtggtgcgcgcttgctgcaaaggcgcctgacgggtccatccacggacctt
gacgtcattcgggcgcgccatgaaagcgtttcattttttttctctgacacgctgattagg
gacgatctggaggctgaacttcgccgtatccctgacctggatcgcgctctatcgcgtctg
gccttggatcgcggcgggccacgggatttgtcggccatccgtgacggattgtctggtgct
gcccgactgtctgacaaattaaagatcgtggacttgccgccccttcttgaaggtgccgtg
caggatcttcaggggcacgatgagctttccgcccttctcgacgaggcgctggtggcagaa
cccccagttcaactccgtgacggaggtttgatcgcgcccggttaccacgccgaattggac
gaggcgcgtaccctacgggatgaagggcgcagcgtgatcgccacgatgcaggcggactat
gttgaggcgactggagtgaacgccctgaagatcaagcacaacaatgtgttggggtatttc
attgaaaccactgccacccacgccgaaaagatgttgaacccaccgctgtcggaacggttc
attcaccgccagaccaccgccaaccaagtgcggtttacaacggtggagctttccgagtta
gagaccaaaatcctgaacgccggaaatcgggcgttggaaatcgagcgggtgctgttccaa
tccctgcgcgacgcgattttgaattgtcaggatcagatcggccaggccgctcgcgggttg
gcagagttggatctatcggctgcgctggcccggcgtgcacgggaaggggactggacgcaa
cccgagatgaccgaggatcgtgcgttcatgattgaaggggcacgtcatccggtggtggag
gccgcattggccaaggacggcacgtcatttgtcgccaacgattgtgacctgagcgccgag
ggtggcgccgctatcaccttgctcaccgggccaaacatggcgggtaaatcgacgtatctt
cgtcagaacgctcttctggtgattatggctcaaaccggtagtttcgtgcctgcgaaatgc
gcgaagatcgggcttgtaagccaggtgttcagccgcgtcggagcctcagacgatttggcg
cggggccgatcaaccttcatggtcgagatggtggaaacggcgacgatcctgaaccaagcc
gacgaccgtgctttggtgatccttgatgagatcgggcgggggacggcgacttatgatggc
ctgtcaattgcctgggcgacgttggaacacctgcatgagaccaaccagtgccgcgcgctt
tttgcgacgcactaccatgaaatgacgtctcttgcgtccaagctggacgggctgaccaac
gcgactgtggccgtgaaagaatgggagggggaggtgatcttcctccacgaagtccgcgag
ggggccgcggacaggtcttatggcgtgcaggtcgcaaaactcgcggggctgccagacgct
gtcatcgcacgggcgcaggtcgtgttggatgcgttggagaaaggcgaacgggagggcggc
gaacgcaaggctgttatcgacgacttgcctctgttcgccatgatgcccgcgccagcgccc
gccccatcggcgccgtctttggtcgaagagaaactccgcgccgtacatcccgatgagatg
acggcgcgcgaggcactgaatttgctctatgaattgaaggctgagcttagctag
DBGET
integrated database retrieval system
