Jannaschia sp. CCS1: Jann_0491
Help
Entry
Jann_0491 CDS
T00330
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jan03000
]
Jann_0491
Transcription factors [BR:
jan03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Jann_0491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ABD53408
UniProt:
Q28V54
LinkDB
All DBs
Position
complement(488947..489894)
Genome browser
AA seq
315 aa
AA seq
DB search
MSDRLPPLTALRAFDAAARHMSFSKAAAELNVTPAALSFQIKSLEEHLEAPLFRRLNRAV
ELTDAGKALAPGASDGFTALASAWRAANRTVDQTSLTVTAGPAFTAKWLAPRLFKFAMAN
PEIELRFSATLRLMDFARDDVDVAIRFSLAKEDPNLDSRPIIREWVTPMMTPELAEAYPD
PTDLARAPLLHQDDIQFLKPAVDWPAWFRAAQLPPRFAAGARFSQADHAIDAALAGAGVV
LGRISLAEKDLKEGRLVMPYKIALATEAKYSFVCPEGSDARPQVRAFREWIEAETATLDA
YREGLTFVNAAEVEQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcgtctccctcccctcaccgcgctgcgcgcctttgatgccgctgctcggcac
atgtccttctccaaagctgcggctgagttgaatgtcacgcccgccgccctgtcgtttcag
atcaaatcgctggaggagcatttggaagcgccgttgttccgtcgcctcaaccgcgcggtg
gaactgaccgatgcgggcaaagccctcgcacccggggcgtccgacgggttcaccgcgctg
gccagtgcctggcgcgcggccaaccgcacggtggatcagaccagcctgaccgtcaccgcg
gggcccgccttcaccgcaaaatggctcgcaccccggctgttcaagttcgccatggccaat
ccggagatcgagcttcggttctcggccaccctgcgcctgatggatttcgcacgcgatgac
gtggacgtggcgatccggttcagcttggccaaggaagatcccaacctcgattcacggccc
atcatccgcgaatgggttacgccgatgatgacgccggagctggccgaggcctatccagac
ccaacagacctcgcccgcgcgccgctgttgcatcaggatgatattcagttcctgaagcct
gccgttgactggcccgcgtggttccgggccgcacaattgccgcctcgttttgcagccggc
gcacggttcagccaggcggatcacgccattgatgcggccttggccggggcgggggtcgtg
ttggggcgtatctctctggccgaaaaggacctgaaagaggggcgtctggtcatgccttac
aagatcgcgctggcgaccgaggcaaagtatagcttcgtctgcccggaaggatcagatgcg
cggccacaggtgcgggcgttccgtgagtggattgaggcagaaacagccacgcttgatgcc
taccgcgaagggctgacattcgtgaacgccgccgaggttgagcaatag
DBGET
integrated database retrieval system
