Jannaschia sp. CCS1: Jann_0513
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Entry
Jann_0513 CDS
T00330
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Jann_0513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jan03021
]
Jann_0513
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_0513
Enzymes [BR:
jan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Jann_0513
Transcription machinery [BR:
jan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Jann_0513
DNA repair and recombination proteins [BR:
jan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Jann_0513
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ABD53430
UniProt:
Q28V32
LinkDB
All DBs
Position
507105..507458
Genome browser
AA seq
117 aa
AA seq
DB search
MARVTVEDCVDKVPNRFELVMLASHRAREIAAGDPLTIDRDNDKNPVVSLREIADETQSA
DDLRERLIESHQTQIEVDEPEEDAMALLQGVEQDRPAQDDMSEEQMLRALMEAQGQK
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgtcacggttgaagattgcgttgataaggtcccgaaccggtttgagttggtg
atgcttgcgtcccaccgcgcccgtgagattgccgcaggcgatccgctgacgatcgaccgc
gacaatgacaagaaccccgtcgtctctttgcgtgaaatcgccgatgagacccagtcggca
gacgatctgcgcgaacgcctgatcgaaagccaccagacgcagatcgaagtcgacgagccc
gaggaagacgccatggcgcttctgcaaggcgtggagcaggatcgccctgcccaggacgac
atgagcgaagagcagatgctgcgcgcgctgatggaagcgcagggtcagaagtaa
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