Jannaschia sp. CCS1: Jann_0522
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Entry
Jann_0522 CDS
T00330
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Jann_0522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jan03019
]
Jann_0522
03009 Ribosome biogenesis [BR:
jan03009
]
Jann_0522
03036 Chromosome and associated proteins [BR:
jan03036
]
Jann_0522
Enzymes [BR:
jan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Jann_0522
Messenger RNA biogenesis [BR:
jan03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Jann_0522
Ribosome biogenesis [BR:
jan03009
]
Eukaryotic type
90S particles
RNase
Jann_0522
Prokaryotic type
rRNA processing factors
Jann_0522
Chromosome and associated proteins [BR:
jan03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Jann_0522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
RM44_endonuclase
DUF7939
DUF6204
Orthopox_F8
Motif
Other DBs
NCBI-ProteinID:
ABD53439
UniProt:
Q28V23
LinkDB
All DBs
Position
514001..514684
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AA seq
227 aa
AA seq
DB search
MKPARELTAFMDRLGYVFEDPALLARALTHSSLSSPTRGDNQRLEFLGDRVLGLVMAEAV
LAADTDAKEGTLAPRFNALVRKEACADVARQIDLGAAMRLGKSEMSAGGRRRMALLGDAM
EAVIAAVYLDGGFASARDLVLRLWSERVQSVEEDARDAKTALQEWAQARGMAPPTYTEVA
RSGPDHAPVFRVRVTLSSGENAEAQAKAKRQAEQQAAKDLLAQLAGE
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccgcgcgggagctgacggccttcatggaccgcctggggtatgtctttgaggac
cccgcattgctcgcgcgcgcgctgacccattcgtccctgtcctcgcccacgcggggcgat
aaccagcggctggagttcctgggcgaccgcgttctgggtttggtgatggccgaggccgtc
ctggccgctgacacggacgcgaaggaaggtacgcttgcgccgcgcttcaacgcgctggtc
cgcaaagaggcctgcgctgacgtggcccgccagattgatctgggtgcggccatgcgtctt
ggcaaatccgagatgtccgcagggggccgccgccgcatggcgcttttgggcgacgcgatg
gaagcggtgatcgccgccgtctatctggatgggggctttgcaagcgcgcgcgatctggtc
ctacgcctctggtccgagcgggtgcaaagcgtcgaggaagatgcgcgcgacgccaaaacg
gcgcttcaggaatgggcgcaggcccgtggtatggcgccgccgacatataccgaagttgcc
cgatccggcccagatcatgcgcccgtttttcgagtccgcgtgacgctgtcctccggcgaa
aacgcggaggctcaggccaaagccaaacgtcaggccgagcagcaggcggcgaaagactta
ctggcgcagctggcgggcgaatga
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