KEGG   Jannaschia sp. CCS1: Jann_0522
Entry
Jann_0522         CDS       T00330                                 
Name
(GenBank) RNAse III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
jan  Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:jan00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Jann_0522
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jan03019]
    Jann_0522
   03009 Ribosome biogenesis [BR:jan03009]
    Jann_0522
   03036 Chromosome and associated proteins [BR:jan03036]
    Jann_0522
Enzymes [BR:jan01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Jann_0522
Messenger RNA biogenesis [BR:jan03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Jann_0522
Ribosome biogenesis [BR:jan03009]
 Eukaryotic type
  90S particles
   RNase
    Jann_0522
 Prokaryotic type
  rRNA processing factors
   Jann_0522
Chromosome and associated proteins [BR:jan03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Jann_0522
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM RM44_endonuclase DUF7939 DUF6204 Orthopox_F8
Other DBs
NCBI-ProteinID: ABD53439
UniProt: Q28V23
LinkDB
Position
514001..514684
AA seq 227 aa
MKPARELTAFMDRLGYVFEDPALLARALTHSSLSSPTRGDNQRLEFLGDRVLGLVMAEAV
LAADTDAKEGTLAPRFNALVRKEACADVARQIDLGAAMRLGKSEMSAGGRRRMALLGDAM
EAVIAAVYLDGGFASARDLVLRLWSERVQSVEEDARDAKTALQEWAQARGMAPPTYTEVA
RSGPDHAPVFRVRVTLSSGENAEAQAKAKRQAEQQAAKDLLAQLAGE
NT seq 684 nt   +upstreamnt  +downstreamnt
atgaaacccgcgcgggagctgacggccttcatggaccgcctggggtatgtctttgaggac
cccgcattgctcgcgcgcgcgctgacccattcgtccctgtcctcgcccacgcggggcgat
aaccagcggctggagttcctgggcgaccgcgttctgggtttggtgatggccgaggccgtc
ctggccgctgacacggacgcgaaggaaggtacgcttgcgccgcgcttcaacgcgctggtc
cgcaaagaggcctgcgctgacgtggcccgccagattgatctgggtgcggccatgcgtctt
ggcaaatccgagatgtccgcagggggccgccgccgcatggcgcttttgggcgacgcgatg
gaagcggtgatcgccgccgtctatctggatgggggctttgcaagcgcgcgcgatctggtc
ctacgcctctggtccgagcgggtgcaaagcgtcgaggaagatgcgcgcgacgccaaaacg
gcgcttcaggaatgggcgcaggcccgtggtatggcgccgccgacatataccgaagttgcc
cgatccggcccagatcatgcgcccgtttttcgagtccgcgtgacgctgtcctccggcgaa
aacgcggaggctcaggccaaagccaaacgtcaggccgagcagcaggcggcgaaagactta
ctggcgcagctggcgggcgaatga

DBGET integrated database retrieval system