Jannaschia sp. CCS1: Jann_0624
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Entry
Jann_0624 CDS
T00330
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jan03009
]
Jann_0624
Enzymes [BR:
jan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Jann_0624
Ribosome biogenesis [BR:
jan03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Jann_0624
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABD53541
LinkDB
All DBs
Position
596769..597833
Genome browser
AA seq
354 aa
AA seq
DB search
MSGVQTLEIGPDDGDQRLDRWFRRIFPHVPQGRIEKMCRKGEIRVDGGRVKSNTRLEVGQ
MVRVPPLPDAADPKADPANWVNNASRISDADEKMIRAAVIYRDDHIIAINKPAGLPTQGG
TGQSRHVDGLAEALKFGLEDKPRLVHRLDKDTSGVLLMARTRMGAKALTDAFRLRSTRKI
YWAAVAGSPLPRMGTIKLGLVKAPGHGRGGENEKMRAVPVDEIAQVDGAKRAETDYAVMS
NLGGRVCWCALVPITGRTHQLRAHMAEIGHPIIGDGKYGGSGQENLGDGWGAQLGGEISR
KLHLHARSLSFRHPMTGAQVNLVAPLPEHMAKTWDTLGWDPRDVPADPFEDDAF
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgttcagacgctggaaatcgggccggacgacggcgatcaacggctggaccgc
tggttccgccgcatctttccccatgtgccccagggtcggatcgagaagatgtgccgcaag
ggcgagatccgcgtcgatggaggccgggtgaagtccaacacccggctggaagtggggcag
atggtccgcgtaccgcccctgcccgatgctgccgatccaaaggcggatccggcaaactgg
gtcaacaacgccagtcgcatcagtgacgcggatgagaagatgatccgcgccgccgtgatc
tatcgcgacgaccatatcatcgcgatcaacaagcccgcgggcctgccgacccagggcggc
accgggcagagccgccatgtggatgggctggcggaggcgttgaagttcgggctggaggac
aagccgaggctggtgcaccggctggacaaggacacgtcgggcgtgctgctgatggcgcgc
acgcggatgggggcgaaggcgctgaccgatgcgtttcggctgcgctccacccggaagatc
tattgggctgccgttgcgggatcgcccctgccgcgcatggggacgatcaagctggggctg
gtgaaagcgccgggccatgggcgcggtggcgagaatgagaagatgcgcgccgtgccggtg
gacgagatcgcccaggtggatggggccaagcgggccgagactgattacgcggtgatgtcc
aaccttggcggtcgcgtgtgctggtgcgcgctggtgccgattacggggcggacgcatcag
ctgcgcgcccacatggccgagatcgggcatccgatcatcggtgacggaaagtatggcggc
agcgggcaggagaaccttggcgacggttggggcgcgcaattgggcggagagatcagccgc
aagctgcatcttcacgcgcgcagcctgtcgtttcggcacccgatgacgggcgcgcaggtc
aatctggtcgcgccgctgcccgagcatatggcgaagacgtgggacaccctcggctgggac
ccgcgcgatgtgcccgcagacccgttcgaggatgatgcgttttga
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