Jannaschia sp. CCS1: Jann_0809
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Entry
Jann_0809 CDS
T00330
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan00020
Citrate cycle (TCA cycle)
jan00190
Oxidative phosphorylation
jan00650
Butanoate metabolism
jan00720
Other carbon fixation pathways
jan01100
Metabolic pathways
jan01110
Biosynthesis of secondary metabolites
jan01120
Microbial metabolism in diverse environments
jan01200
Carbon metabolism
Module
jan_M00009
Citrate cycle (TCA cycle, Krebs cycle)
jan_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
jan_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Jann_0809
00650 Butanoate metabolism
Jann_0809
09102 Energy metabolism
00190 Oxidative phosphorylation
Jann_0809
00720 Other carbon fixation pathways
Jann_0809
Enzymes [BR:
jan01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Jann_0809
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
Thi4
Pyr_redox_2
FAD_binding_3
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ABD53726
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Position
complement(768820..770640)
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AA seq
606 aa
AA seq
DB search
MKDTTSPAYALTHHTYDVVVVGAGGSGLRATLGMAEQGLKTACISKVFPTRSHTVAAQGG
IAASLGNMGPDHWHWHMYDTVKGSDWLGDTDAMEYLAREAPKAVYELEHYGVPFSRTEEG
KIYQRPFGGHTTEFGEGPPVQRTCAAADRTGHAILHTLYGQSLKNDAEFFIEYFATDLLM
DDEGQCVGVVAWKLDDGTMHVFHSKMTVLATGGYGRAYFSATSAHTCTGDGGGMVARAGL
PLQDMEFVQFHPTGIYGAGCLITEGARGEGGYLTNSEGERFMERYAPTYKDLASRDVVSR
CMTMEIRDGRGVGENGDHIHLHLNHLPKETLDLRLPGISESARIFAGVDLTKEPIPVLPT
VHYNMGGIPTNYLGEVLNPTADDPMKTVPGLMAVGEAGCASVHGANRLGSNSLIDLVVFG
RAAAIKAGEIVDPNAKNPDVPQHQIDKALARFDDVRHADGGTPTAELRLEMQKTMQADAA
VFRTDKTLAEGLEKMTGVAGKMDDVAVTDRSMIWNSDLMETLELTNLMPNALATIAGAEA
RKESRGAHAHEDYPDRDDVDWRKHSLAMVDGNKVDLSYRDVGLSPLIGHNEGGIDMDKIK
PKARVY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataccacttcccccgcctacgccctgacccaccacacctatgacgtagtggtc
gtgggtgccggtggctctggcttgcgggcaacgcttggcatggcggaacaaggcctgaag
acggcctgtatctccaaggtgttcccgacccgctcccacaccgtggccgcgcaaggcggc
atcgcggcgagccttggcaacatgggtccggaccattggcactggcacatgtacgacacc
gtgaagggctcggactggttgggtgacacggacgcgatggaatacctcgcgcgcgaagcc
cccaaggcggtttatgagctggagcattacggcgtgccgttttcccgcaccgaagaaggc
aagatctaccagcgccccttcggcggccacaccaccgaattcggcgaaggcccccccgtg
cagcgcacctgtgccgccgccgaccggacggggcacgcaatcctgcacacgctctatggc
caatccctgaagaacgacgcggaattcttcatcgaatatttcgccactgatctgttgatg
gatgatgaaggccaatgcgtcggcgtcgtggcctggaaactggacgacggcaccatgcac
gtcttccactccaagatgaccgttctggcgacgggcggttatggtcgtgcttacttcagc
gccacaagcgcccatacctgcaccggcgacggcggcggcatggtcgctcgggcgggtctg
ccgctccaagacatggaattcgtacaatttcaccccaccggcatctacggcgccggctgc
ctgatcaccgagggcgcgcggggcgaaggcggctatctgacgaactccgagggcgagcga
ttcatggaacgctatgcgcccacctacaaggacctcgcgtcgcgcgatgtggtgtcgcgt
tgcatgacgatggagatccgcgacggccgcggcgttggcgagaatggggatcacatccac
ctgcacctcaaccacctgccgaaggaaacgctggacctgcgcctgccggggatctctgag
tccgcgcggatatttgcgggggtcgacctgacgaaggaaccgatcccggttctgccgacg
gtccactacaacatgggcggtatccccacgaattatctgggggaggtgctgaaccccacc
gccgatgatccgatgaagaccgtccccggcctgatggctgtgggcgaggcgggctgcgca
agcgttcatggggcgaaccgtctgggctccaactcgctgatcgacctagtcgtctttggc
cgcgccgccgcgatcaaggcgggtgaaatcgtcgatcccaacgccaagaatcccgacgtg
ccccagcaccagatcgacaaggcgctggcgcggtttgacgacgtgcgccatgccgatggc
ggcacacccacggcggaattgcggttggagatgcagaagaccatgcaggccgatgctgcc
gtcttccgcaccgacaagacactcgccgaggggctggaaaagatgaccggtgtggcgggc
aagatggacgatgtggccgtcaccgaccggtcgatgatctggaactccgacctgatggag
acgctggagctgaccaacctgatgcccaacgctctggccacgattgcaggtgcagaggcg
cgcaaggaaagccggggtgcccatgcccatgaggattatccagaccgtgacgacgtagac
tggcgcaagcattcgctggcgatggtcgatggcaacaaggtcgacctcagctaccgtgac
gttggcctgtccccactgatcggccataatgagggcgggatcgacatggacaagatcaag
cccaaggcgcgggtctattga
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