KEGG   Jannaschia sp. CCS1: Jann_0986
Entry
Jann_0986         CDS       T00330                                 
Name
(GenBank) DEAD/DEAH box helicase-like protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
jan  Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:jan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:jan03400]
    Jann_0986
Enzymes [BR:jan01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Jann_0986
    5.6.2.6  RNA 3'-5' helicase
     Jann_0986
DNA repair and recombination proteins [BR:jan03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Jann_0986
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 Sorb
Other DBs
NCBI-ProteinID: ABD53903
UniProt: Q28TQ9
LinkDB
Position
complement(941928..944351)
AA seq 807 aa
MTPALPPQIERWFTARGWSIHPHQREMLALADQPCQLLIAPTGGGKTMAGFLPTLAELAD
GTHDGLHTLYISPLKALAADIKRNLIGPVDEMGLPIRIEDRTGDTPSSRKRRQRADPPHI
LLTTPESLALLTSYEDAARTFKGLQRVIVDEIHALSESKRGDQLMLALSRLSTLAPGLRR
VGLSATVEDPDAIARILARNPDPCAILQADPGPDPDISMLTTDAPPPWSGGGGKYAMEAV
LEQVKAHNTTLIFHNTRAQAEIFFHHLWLSNEDEIPIGIHHGALSREQRERVEQAMVAGD
LKAIVCTGSLDLGIDWGDVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSKALIVPANRFE
VIECIAALQAVRDHTLDGDTDHTGPLDVLCQHILIRACAGPFTGDDLYAEVTTAGAYTHL
PREMFERCVDFVATGGYALRAYDQWQRLVQNGDEYRLRDPRATTRIRMNIGTIVDADKMP
VRMQKTRGGKPLGEVEEYFASTLRKGDTFLIGGKIVRYEGMREMTVEVSRSSTQKPKIAT
FMGTKFATSTQLSDRILTMFRQDDWPELPDHTRDWLHLHRKVSQLPEKDRLLVETFPHDG
RQHLVAYGFAGRNAQQTLGLLLTHRMETERLNPMGFVATDYATMVWGLDEVTDPKPLFSH
ETLLATMETWLADNAVMKRTFKSSAIIAGLVDRSMPGGKRKTGRQATFSTDILYDTLRKY
DPDHVMMEITRQEAMRGLVDFGRIEGMLDRIGDRIDHRPLPRVSPLAAPLFLEAGRVPVQ
GLANERLLEEETQRLMETAGLSFGPAQ
NT seq 2424 nt   +upstreamnt  +downstreamnt
atgacacccgccctcccccctcagattgagcgctggtttaccgcccgagggtggtcgatc
catccccatcaacgcgagatgctcgcgctggccgatcagccctgtcagctgttgatcgca
cccacgggtggcggcaaaaccatggccgggtttttgcccactttggcggaattggcggat
ggcacacacgatgggctgcatacgctttacatcagtcctctcaaggccttagccgccgat
atcaagcgaaacctcattggtccggtggatgaaatgggcctgcccatccgtattgaggac
cgcaccggcgacaccccttccagccggaagcgccgccaacgcgcagatcccccacatatt
cttctgacgacgcctgaaagcctggccttgctcacctcctacgaggacgcggcgcgcacg
ttcaaagggctccagcgggtgattgtcgatgaaattcatgcgcttagcgagtccaagcgc
ggcgatcagctgatgctcgcgctgtctcgcctgtcaacgctcgcgcccggcctccggcgc
gtggggctgtcagcgacggtcgaagatccggacgccatcgcccgcatccttgcccgcaac
cctgatccctgcgcaatccttcaggccgatcccggccccgaccccgacatttcaatgctg
accacagacgccccaccgccctggtccgggggcggcgggaaatacgcgatggaggccgtg
ctggagcaagtaaaggcccataataccacgttaatttttcataacacccgcgcccaggcc
gagatcttctttcatcacctttggctatccaacgaggatgagatccccatcggcatccac
cacggtgcgttgtcacgggaacaacgcgaacgggtcgaacaggctatggtcgcgggcgac
ctgaaggccatcgtttgcaccggtagtctcgatctcggcatcgattggggcgacgtggat
ctggtgatccaggtgggcgcacccaagaacgtcaagcggttggtgcagcggatagggcgc
gccaatcaccgctataacgcgccctctaaggctttgattgtgcccgccaatcggtttgaa
gtcatcgagtgtatcgccgcgcttcaggccgtccgggaccacacattggacggtgacacc
gaccataccggccctttggatgtgctttgccagcatatcctgatccgcgcctgcgccgga
ccgtttacgggtgatgatctctacgccgaggtcacaaccgcaggcgcgtatacccacctg
ccgcgcgagatgttcgagcgttgcgtggatttcgtggccaccggcggctatgccctgcgc
gcctatgatcaatggcagcggcttgtccaaaacggggacgaataccgcctgcgcgatccg
cgtgccaccacccgcattcgcatgaatatcggcaccatcgtcgacgcagataagatgccc
gtgaggatgcaaaaaacccgtgggggcaagcctttaggggaagtggaggaatacttcgcc
tccaccctgcgcaaaggcgatacgttccttatcggcggaaaaatcgtccgctatgagggg
atgcgcgaaatgacggtagaggtctcccgcagctccacccagaagcccaagatcgcgacg
ttcatgggcacgaaattcgccacctcgacacagctgagcgaccgcattctgaccatgttt
cgccaggatgactggcccgaactgcccgatcacacacgcgactggctgcacctgcatcgc
aaggtctcgcagctgcctgagaaggatcgcctgttggtcgagaccttcccgcacgacggg
cggcagcacttggtggcctacggctttgcgggccgaaacgcgcaacagacattgggtctg
ctgctgacgcacaggatggaaaccgaacgcctcaacccgatgggcttcgtggccaccgac
tatgcgaccatggtctgggggcttgatgaagtcactgatcccaaaccgcttttcagccac
gagacccttctggcgacgatggagacctggctggcagacaacgcggtgatgaagcggacg
ttcaagagcagcgcgatcatcgcgggccttgtggaccggtccatgcccggcggcaaacgc
aagacggggcgccaggccacgttctcaaccgatatcctgtatgacactctgcgcaagtat
gacccggatcatgtgatgatggagatcacgcggcaggaggcgatgcgcggccttgtggat
ttcggccggattgaaggcatgttggaccggatcggcgaccgtatagaccaccgccccctc
ccccgcgtcagccccctggccgcacccctgtttctggaagccgggcgcgttcccgttcaa
ggactcgccaatgagcgcttgctggaagaggaaacgcagcgcctgatggagacggcgggc
ctgtcattcggacccgcgcaatga

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